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Homemade plasmid Miniprep solutions for affordable research in low-fund laboratories
As a consequence of Covid-19 pandemic, the basic lab consumables are in shortage, especially in the low-income countries. Thus, the main objective of the present study is to develop and evaluate homemade solution to isolate plasmid. To pursue this objective, RNase A was overexpressed in Bl21 DE3 cel...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9626700/ https://www.ncbi.nlm.nih.gov/pubmed/36319914 http://dx.doi.org/10.1186/s13568-022-01483-x |
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author | Elnagar, Mohamed A. Ibrahim, Mohamed F. Albert, Magdy M.Talal, Maya Abdelfattah, Mahmoud M. El-Dabaa, Ehab Helwa, Reham |
author_facet | Elnagar, Mohamed A. Ibrahim, Mohamed F. Albert, Magdy M.Talal, Maya Abdelfattah, Mahmoud M. El-Dabaa, Ehab Helwa, Reham |
author_sort | Elnagar, Mohamed A. |
collection | PubMed |
description | As a consequence of Covid-19 pandemic, the basic lab consumables are in shortage, especially in the low-income countries. Thus, the main objective of the present study is to develop and evaluate homemade solution to isolate plasmid. To pursue this objective, RNase A was overexpressed in Bl21 DE3 cells (E. coli strain) and prepared as crude refolding reaction with proper activity. Also, lysis buffers, neutralization buffer, and washing buffers were prepared. The homemade miniprep kit showed successful isolation of the px48SpCas9 plasmid. The prepared plasmid purity was enough to be used successfully in PCR amplification. In addition, to get extra benefits from this study, seven primers were designed to match the plasmid backbone to produce DNA ladder (100–1500 bp). In conclusion, we were able to have attainable working solutions for plasmid miniprep and DNA ladder. |
format | Online Article Text |
id | pubmed-9626700 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-96267002022-11-02 Homemade plasmid Miniprep solutions for affordable research in low-fund laboratories Elnagar, Mohamed A. Ibrahim, Mohamed F. Albert, Magdy M.Talal, Maya Abdelfattah, Mahmoud M. El-Dabaa, Ehab Helwa, Reham AMB Express Original Article As a consequence of Covid-19 pandemic, the basic lab consumables are in shortage, especially in the low-income countries. Thus, the main objective of the present study is to develop and evaluate homemade solution to isolate plasmid. To pursue this objective, RNase A was overexpressed in Bl21 DE3 cells (E. coli strain) and prepared as crude refolding reaction with proper activity. Also, lysis buffers, neutralization buffer, and washing buffers were prepared. The homemade miniprep kit showed successful isolation of the px48SpCas9 plasmid. The prepared plasmid purity was enough to be used successfully in PCR amplification. In addition, to get extra benefits from this study, seven primers were designed to match the plasmid backbone to produce DNA ladder (100–1500 bp). In conclusion, we were able to have attainable working solutions for plasmid miniprep and DNA ladder. Springer Berlin Heidelberg 2022-11-01 /pmc/articles/PMC9626700/ /pubmed/36319914 http://dx.doi.org/10.1186/s13568-022-01483-x Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Article Elnagar, Mohamed A. Ibrahim, Mohamed F. Albert, Magdy M.Talal, Maya Abdelfattah, Mahmoud M. El-Dabaa, Ehab Helwa, Reham Homemade plasmid Miniprep solutions for affordable research in low-fund laboratories |
title | Homemade plasmid Miniprep solutions for affordable research in low-fund laboratories |
title_full | Homemade plasmid Miniprep solutions for affordable research in low-fund laboratories |
title_fullStr | Homemade plasmid Miniprep solutions for affordable research in low-fund laboratories |
title_full_unstemmed | Homemade plasmid Miniprep solutions for affordable research in low-fund laboratories |
title_short | Homemade plasmid Miniprep solutions for affordable research in low-fund laboratories |
title_sort | homemade plasmid miniprep solutions for affordable research in low-fund laboratories |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9626700/ https://www.ncbi.nlm.nih.gov/pubmed/36319914 http://dx.doi.org/10.1186/s13568-022-01483-x |
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