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Bacterial Community of Galchi-Baechu Kimchi Based on Culture-Dependent and - Independent Investigation and Selection of Starter Candidates

In this study, the bacterial community of galchi-baechu kimchi was determined using culture-based and culture-independent techniques (next generation sequencing:NGS), and showed discrepancies between results. Weissella koreensis and Pediococcus inopinatus were the dominant species according to the N...

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Autores principales: Kim, Tao, Heo, Sojeong, Na, Hong-Eun, Lee, Gawon, Kim, Jong-Hoon, Kwak, Mi-Sun, Sung, Moon-Hee, Jeong, Do-Won
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Society for Microbiology and Biotechnology 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9628854/
https://www.ncbi.nlm.nih.gov/pubmed/35001009
http://dx.doi.org/10.4014/jmb.2112.12003
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author Kim, Tao
Heo, Sojeong
Na, Hong-Eun
Lee, Gawon
Kim, Jong-Hoon
Kwak, Mi-Sun
Sung, Moon-Hee
Jeong, Do-Won
author_facet Kim, Tao
Heo, Sojeong
Na, Hong-Eun
Lee, Gawon
Kim, Jong-Hoon
Kwak, Mi-Sun
Sung, Moon-Hee
Jeong, Do-Won
author_sort Kim, Tao
collection PubMed
description In this study, the bacterial community of galchi-baechu kimchi was determined using culture-based and culture-independent techniques (next generation sequencing:NGS), and showed discrepancies between results. Weissella koreensis and Pediococcus inopinatus were the dominant species according to the NGS results, while Bacillus species and P. inopinatus were dominant in the culture-dependent analysis. To identify safe starter candidates, sixty-five Bacillus strains isolated from galchi-baechu kimchi using culture-dependent methods were evaluated for their antibiotic resistance, presence of toxin genes, and hemolytic activity. Strains were then assessed for salt tolerance and protease and lipase activity. As a result, four strains-B. safensis GN5_10, B. subtilis GN5_19, B. velezensis GN5_25, and B. velezensis GT8-were selected as safe starter candidates for use in fermented foods.
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spelling pubmed-96288542022-12-13 Bacterial Community of Galchi-Baechu Kimchi Based on Culture-Dependent and - Independent Investigation and Selection of Starter Candidates Kim, Tao Heo, Sojeong Na, Hong-Eun Lee, Gawon Kim, Jong-Hoon Kwak, Mi-Sun Sung, Moon-Hee Jeong, Do-Won J Microbiol Biotechnol Research article In this study, the bacterial community of galchi-baechu kimchi was determined using culture-based and culture-independent techniques (next generation sequencing:NGS), and showed discrepancies between results. Weissella koreensis and Pediococcus inopinatus were the dominant species according to the NGS results, while Bacillus species and P. inopinatus were dominant in the culture-dependent analysis. To identify safe starter candidates, sixty-five Bacillus strains isolated from galchi-baechu kimchi using culture-dependent methods were evaluated for their antibiotic resistance, presence of toxin genes, and hemolytic activity. Strains were then assessed for salt tolerance and protease and lipase activity. As a result, four strains-B. safensis GN5_10, B. subtilis GN5_19, B. velezensis GN5_25, and B. velezensis GT8-were selected as safe starter candidates for use in fermented foods. The Korean Society for Microbiology and Biotechnology 2022-03-28 2021-12-29 /pmc/articles/PMC9628854/ /pubmed/35001009 http://dx.doi.org/10.4014/jmb.2112.12003 Text en Copyright © 2022 by the authors. Licensee KMB. https://creativecommons.org/licenses/by/4.0/This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research article
Kim, Tao
Heo, Sojeong
Na, Hong-Eun
Lee, Gawon
Kim, Jong-Hoon
Kwak, Mi-Sun
Sung, Moon-Hee
Jeong, Do-Won
Bacterial Community of Galchi-Baechu Kimchi Based on Culture-Dependent and - Independent Investigation and Selection of Starter Candidates
title Bacterial Community of Galchi-Baechu Kimchi Based on Culture-Dependent and - Independent Investigation and Selection of Starter Candidates
title_full Bacterial Community of Galchi-Baechu Kimchi Based on Culture-Dependent and - Independent Investigation and Selection of Starter Candidates
title_fullStr Bacterial Community of Galchi-Baechu Kimchi Based on Culture-Dependent and - Independent Investigation and Selection of Starter Candidates
title_full_unstemmed Bacterial Community of Galchi-Baechu Kimchi Based on Culture-Dependent and - Independent Investigation and Selection of Starter Candidates
title_short Bacterial Community of Galchi-Baechu Kimchi Based on Culture-Dependent and - Independent Investigation and Selection of Starter Candidates
title_sort bacterial community of galchi-baechu kimchi based on culture-dependent and - independent investigation and selection of starter candidates
topic Research article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9628854/
https://www.ncbi.nlm.nih.gov/pubmed/35001009
http://dx.doi.org/10.4014/jmb.2112.12003
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