Cargando…

NFE2L3 as a Potential Functional Gene Regulating Immune Microenvironment in Human Kidney Cancer

With the increasing incidence and mortality of renal cancer, it is pressing to find new biomarkers and drug targets for diagnosis and treatment. However, as one negative upstream regulator of p53, the prognostic and immunological role of NFE2L3 in renal cancer is still barely known. We investigated...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Qian, Tang, Donge, Zha, Aiyun, He, Jingquan, Li, Dandan, Chen, Yumei, Cai, Wanxia, Dai, Jian, Luan, Shaodong, Yin, Lianghong, Zhang, Wei, Dai, Yong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9629961/
https://www.ncbi.nlm.nih.gov/pubmed/36337840
http://dx.doi.org/10.1155/2022/9085186
_version_ 1784823506097143808
author Zhang, Qian
Tang, Donge
Zha, Aiyun
He, Jingquan
Li, Dandan
Chen, Yumei
Cai, Wanxia
Dai, Jian
Luan, Shaodong
Yin, Lianghong
Zhang, Wei
Dai, Yong
author_facet Zhang, Qian
Tang, Donge
Zha, Aiyun
He, Jingquan
Li, Dandan
Chen, Yumei
Cai, Wanxia
Dai, Jian
Luan, Shaodong
Yin, Lianghong
Zhang, Wei
Dai, Yong
author_sort Zhang, Qian
collection PubMed
description With the increasing incidence and mortality of renal cancer, it is pressing to find new biomarkers and drug targets for diagnosis and treatment. However, as one negative upstream regulator of p53, the prognostic and immunological role of NFE2L3 in renal cancer is still barely known. We investigated the expression, prognostic value, and relevant pathways of NFE2L3 using the datasets from public databases, including The Cancer Genome Atlas Program (TCGA), Genotype-Tissue Expression (GTEx), Cancer Cell Line Encyclopedia (CCLE), and UALCAN. Furthermore, we analyzed the relationship between NFE2L3 expression and the immune microenvironment using distinct methods. We found that NFE2L3 was higher expressed in kidney renal clear cell carcinoma (KIRC) and kidney renal papillary cell carcinoma (KIRP) tissues than adjacent normal tissues. Additionally, we identified NFE2L3 as one survival-related factor for KIRC and KIRP. The enrichment analyses revealed that NFE2L3 was associated with a variety of immune-relevant pathways in KIRC and related to the infiltration ratios of 17 types of immune cells in KIRC patients. Ultimately, we demonstrated nine significantly enriched mutations, such as TP53 and MET, in NFE2L3-expression-changing groups. The elevated expression of NFE2L3 in renal cancerous tissues versus normal tissues is associated with poor outcomes in patients. Besides, NFE2L3 has a role in the regulation of the immune microenvironment in renal cancer patients. The findings of our study provide a potential prognostic biomarker and a new drug target for renal cancer.
format Online
Article
Text
id pubmed-9629961
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-96299612022-11-03 NFE2L3 as a Potential Functional Gene Regulating Immune Microenvironment in Human Kidney Cancer Zhang, Qian Tang, Donge Zha, Aiyun He, Jingquan Li, Dandan Chen, Yumei Cai, Wanxia Dai, Jian Luan, Shaodong Yin, Lianghong Zhang, Wei Dai, Yong Biomed Res Int Research Article With the increasing incidence and mortality of renal cancer, it is pressing to find new biomarkers and drug targets for diagnosis and treatment. However, as one negative upstream regulator of p53, the prognostic and immunological role of NFE2L3 in renal cancer is still barely known. We investigated the expression, prognostic value, and relevant pathways of NFE2L3 using the datasets from public databases, including The Cancer Genome Atlas Program (TCGA), Genotype-Tissue Expression (GTEx), Cancer Cell Line Encyclopedia (CCLE), and UALCAN. Furthermore, we analyzed the relationship between NFE2L3 expression and the immune microenvironment using distinct methods. We found that NFE2L3 was higher expressed in kidney renal clear cell carcinoma (KIRC) and kidney renal papillary cell carcinoma (KIRP) tissues than adjacent normal tissues. Additionally, we identified NFE2L3 as one survival-related factor for KIRC and KIRP. The enrichment analyses revealed that NFE2L3 was associated with a variety of immune-relevant pathways in KIRC and related to the infiltration ratios of 17 types of immune cells in KIRC patients. Ultimately, we demonstrated nine significantly enriched mutations, such as TP53 and MET, in NFE2L3-expression-changing groups. The elevated expression of NFE2L3 in renal cancerous tissues versus normal tissues is associated with poor outcomes in patients. Besides, NFE2L3 has a role in the regulation of the immune microenvironment in renal cancer patients. The findings of our study provide a potential prognostic biomarker and a new drug target for renal cancer. Hindawi 2022-10-26 /pmc/articles/PMC9629961/ /pubmed/36337840 http://dx.doi.org/10.1155/2022/9085186 Text en Copyright © 2022 Qian Zhang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Zhang, Qian
Tang, Donge
Zha, Aiyun
He, Jingquan
Li, Dandan
Chen, Yumei
Cai, Wanxia
Dai, Jian
Luan, Shaodong
Yin, Lianghong
Zhang, Wei
Dai, Yong
NFE2L3 as a Potential Functional Gene Regulating Immune Microenvironment in Human Kidney Cancer
title NFE2L3 as a Potential Functional Gene Regulating Immune Microenvironment in Human Kidney Cancer
title_full NFE2L3 as a Potential Functional Gene Regulating Immune Microenvironment in Human Kidney Cancer
title_fullStr NFE2L3 as a Potential Functional Gene Regulating Immune Microenvironment in Human Kidney Cancer
title_full_unstemmed NFE2L3 as a Potential Functional Gene Regulating Immune Microenvironment in Human Kidney Cancer
title_short NFE2L3 as a Potential Functional Gene Regulating Immune Microenvironment in Human Kidney Cancer
title_sort nfe2l3 as a potential functional gene regulating immune microenvironment in human kidney cancer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9629961/
https://www.ncbi.nlm.nih.gov/pubmed/36337840
http://dx.doi.org/10.1155/2022/9085186
work_keys_str_mv AT zhangqian nfe2l3asapotentialfunctionalgeneregulatingimmunemicroenvironmentinhumankidneycancer
AT tangdonge nfe2l3asapotentialfunctionalgeneregulatingimmunemicroenvironmentinhumankidneycancer
AT zhaaiyun nfe2l3asapotentialfunctionalgeneregulatingimmunemicroenvironmentinhumankidneycancer
AT hejingquan nfe2l3asapotentialfunctionalgeneregulatingimmunemicroenvironmentinhumankidneycancer
AT lidandan nfe2l3asapotentialfunctionalgeneregulatingimmunemicroenvironmentinhumankidneycancer
AT chenyumei nfe2l3asapotentialfunctionalgeneregulatingimmunemicroenvironmentinhumankidneycancer
AT caiwanxia nfe2l3asapotentialfunctionalgeneregulatingimmunemicroenvironmentinhumankidneycancer
AT daijian nfe2l3asapotentialfunctionalgeneregulatingimmunemicroenvironmentinhumankidneycancer
AT luanshaodong nfe2l3asapotentialfunctionalgeneregulatingimmunemicroenvironmentinhumankidneycancer
AT yinlianghong nfe2l3asapotentialfunctionalgeneregulatingimmunemicroenvironmentinhumankidneycancer
AT zhangwei nfe2l3asapotentialfunctionalgeneregulatingimmunemicroenvironmentinhumankidneycancer
AT daiyong nfe2l3asapotentialfunctionalgeneregulatingimmunemicroenvironmentinhumankidneycancer