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Simple Monovalent Metal Ion Logical Order to Regulate the Secondary Conformation of G-Quadruplex
[Image: see text] Based on the reactions of different sequences with single ions K(+), Na, NH(4)(+), double ions high + low, low + high, and triple ions with different addition orders, the best stable ion combinations of 12 quadruplexes with different DNA sequences were reported. From the fluorescen...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9631730/ https://www.ncbi.nlm.nih.gov/pubmed/36340069 http://dx.doi.org/10.1021/acsomega.2c05243 |
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author | Tong, Xin Ga, Lu Eerdun, Chaolu Zhao, Ruiguo Ai, Jun |
author_facet | Tong, Xin Ga, Lu Eerdun, Chaolu Zhao, Ruiguo Ai, Jun |
author_sort | Tong, Xin |
collection | PubMed |
description | [Image: see text] Based on the reactions of different sequences with single ions K(+), Na, NH(4)(+), double ions high + low, low + high, and triple ions with different addition orders, the best stable ion combinations of 12 quadruplexes with different DNA sequences were reported. From the fluorescence spectrum, except for HT-V15 and PW17 and AS1411 and HT-V18, the structural stability of G-quadrangle formed basically follows a certain rule. In terms of this experiment, according to circular dichroism, the antiparallel quadrupole structure has the largest proportion among quadrupole structures, and 12 optimal DNA addition schemes and sequences have been obtained through exploration. It is worth mentioning that, on the whole, the best addition scheme of AS1411 and HT-V18 is a three-ion scheme, which provides an effective reference for similar experiments in the future. |
format | Online Article Text |
id | pubmed-9631730 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-96317302022-11-04 Simple Monovalent Metal Ion Logical Order to Regulate the Secondary Conformation of G-Quadruplex Tong, Xin Ga, Lu Eerdun, Chaolu Zhao, Ruiguo Ai, Jun ACS Omega [Image: see text] Based on the reactions of different sequences with single ions K(+), Na, NH(4)(+), double ions high + low, low + high, and triple ions with different addition orders, the best stable ion combinations of 12 quadruplexes with different DNA sequences were reported. From the fluorescence spectrum, except for HT-V15 and PW17 and AS1411 and HT-V18, the structural stability of G-quadrangle formed basically follows a certain rule. In terms of this experiment, according to circular dichroism, the antiparallel quadrupole structure has the largest proportion among quadrupole structures, and 12 optimal DNA addition schemes and sequences have been obtained through exploration. It is worth mentioning that, on the whole, the best addition scheme of AS1411 and HT-V18 is a three-ion scheme, which provides an effective reference for similar experiments in the future. American Chemical Society 2022-10-20 /pmc/articles/PMC9631730/ /pubmed/36340069 http://dx.doi.org/10.1021/acsomega.2c05243 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Tong, Xin Ga, Lu Eerdun, Chaolu Zhao, Ruiguo Ai, Jun Simple Monovalent Metal Ion Logical Order to Regulate the Secondary Conformation of G-Quadruplex |
title | Simple Monovalent
Metal Ion Logical Order to Regulate
the Secondary Conformation of G-Quadruplex |
title_full | Simple Monovalent
Metal Ion Logical Order to Regulate
the Secondary Conformation of G-Quadruplex |
title_fullStr | Simple Monovalent
Metal Ion Logical Order to Regulate
the Secondary Conformation of G-Quadruplex |
title_full_unstemmed | Simple Monovalent
Metal Ion Logical Order to Regulate
the Secondary Conformation of G-Quadruplex |
title_short | Simple Monovalent
Metal Ion Logical Order to Regulate
the Secondary Conformation of G-Quadruplex |
title_sort | simple monovalent
metal ion logical order to regulate
the secondary conformation of g-quadruplex |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9631730/ https://www.ncbi.nlm.nih.gov/pubmed/36340069 http://dx.doi.org/10.1021/acsomega.2c05243 |
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