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Simple Monovalent Metal Ion Logical Order to Regulate the Secondary Conformation of G-Quadruplex

[Image: see text] Based on the reactions of different sequences with single ions K(+), Na, NH(4)(+), double ions high + low, low + high, and triple ions with different addition orders, the best stable ion combinations of 12 quadruplexes with different DNA sequences were reported. From the fluorescen...

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Autores principales: Tong, Xin, Ga, Lu, Eerdun, Chaolu, Zhao, Ruiguo, Ai, Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9631730/
https://www.ncbi.nlm.nih.gov/pubmed/36340069
http://dx.doi.org/10.1021/acsomega.2c05243
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author Tong, Xin
Ga, Lu
Eerdun, Chaolu
Zhao, Ruiguo
Ai, Jun
author_facet Tong, Xin
Ga, Lu
Eerdun, Chaolu
Zhao, Ruiguo
Ai, Jun
author_sort Tong, Xin
collection PubMed
description [Image: see text] Based on the reactions of different sequences with single ions K(+), Na, NH(4)(+), double ions high + low, low + high, and triple ions with different addition orders, the best stable ion combinations of 12 quadruplexes with different DNA sequences were reported. From the fluorescence spectrum, except for HT-V15 and PW17 and AS1411 and HT-V18, the structural stability of G-quadrangle formed basically follows a certain rule. In terms of this experiment, according to circular dichroism, the antiparallel quadrupole structure has the largest proportion among quadrupole structures, and 12 optimal DNA addition schemes and sequences have been obtained through exploration. It is worth mentioning that, on the whole, the best addition scheme of AS1411 and HT-V18 is a three-ion scheme, which provides an effective reference for similar experiments in the future.
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spelling pubmed-96317302022-11-04 Simple Monovalent Metal Ion Logical Order to Regulate the Secondary Conformation of G-Quadruplex Tong, Xin Ga, Lu Eerdun, Chaolu Zhao, Ruiguo Ai, Jun ACS Omega [Image: see text] Based on the reactions of different sequences with single ions K(+), Na, NH(4)(+), double ions high + low, low + high, and triple ions with different addition orders, the best stable ion combinations of 12 quadruplexes with different DNA sequences were reported. From the fluorescence spectrum, except for HT-V15 and PW17 and AS1411 and HT-V18, the structural stability of G-quadrangle formed basically follows a certain rule. In terms of this experiment, according to circular dichroism, the antiparallel quadrupole structure has the largest proportion among quadrupole structures, and 12 optimal DNA addition schemes and sequences have been obtained through exploration. It is worth mentioning that, on the whole, the best addition scheme of AS1411 and HT-V18 is a three-ion scheme, which provides an effective reference for similar experiments in the future. American Chemical Society 2022-10-20 /pmc/articles/PMC9631730/ /pubmed/36340069 http://dx.doi.org/10.1021/acsomega.2c05243 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Tong, Xin
Ga, Lu
Eerdun, Chaolu
Zhao, Ruiguo
Ai, Jun
Simple Monovalent Metal Ion Logical Order to Regulate the Secondary Conformation of G-Quadruplex
title Simple Monovalent Metal Ion Logical Order to Regulate the Secondary Conformation of G-Quadruplex
title_full Simple Monovalent Metal Ion Logical Order to Regulate the Secondary Conformation of G-Quadruplex
title_fullStr Simple Monovalent Metal Ion Logical Order to Regulate the Secondary Conformation of G-Quadruplex
title_full_unstemmed Simple Monovalent Metal Ion Logical Order to Regulate the Secondary Conformation of G-Quadruplex
title_short Simple Monovalent Metal Ion Logical Order to Regulate the Secondary Conformation of G-Quadruplex
title_sort simple monovalent metal ion logical order to regulate the secondary conformation of g-quadruplex
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9631730/
https://www.ncbi.nlm.nih.gov/pubmed/36340069
http://dx.doi.org/10.1021/acsomega.2c05243
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