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Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
Huanglongbing (HLB), also known as citrus greening disease, is caused by the bacterium Candidatus Liberibacter asiaticus (CLas). It is a serious threat to global citrus production. This bacterium is transmitted by the Asian citrus psyllid, Diaphorina citri (Hemiptera). There are no effective in plan...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
GigaScience Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9631960/ https://www.ncbi.nlm.nih.gov/pubmed/36824344 http://dx.doi.org/10.46471/gigabyte.20 |
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author | Massimino, Crissy Vosburg, Chad Shippy, Teresa Hosmani, Prashant S. Flores-Gonzalez, Mirella Mueller, Lukas A. Hunter, Wayne B. Benoit, Joshua B. Brown, Susan J. D’Elia, Tom Saha, Surya |
author_facet | Massimino, Crissy Vosburg, Chad Shippy, Teresa Hosmani, Prashant S. Flores-Gonzalez, Mirella Mueller, Lukas A. Hunter, Wayne B. Benoit, Joshua B. Brown, Susan J. D’Elia, Tom Saha, Surya |
author_sort | Massimino, Crissy |
collection | PubMed |
description | Huanglongbing (HLB), also known as citrus greening disease, is caused by the bacterium Candidatus Liberibacter asiaticus (CLas). It is a serious threat to global citrus production. This bacterium is transmitted by the Asian citrus psyllid, Diaphorina citri (Hemiptera). There are no effective in planta treatments for CLas. Therefore, one strategy is to manage the psyllid population. Manual annotation of the D. citri genome can identify and characterize gene families that could be novel targets for psyllid control. The yellow gene family is an excellent target because yellow genes, which have roles in melanization, are linked to development and immunity. Combined analysis of the genome with RNA-seq datasets, sequence homology, and phylogenetic trees were used to identify and annotate nine yellow genes in the D. citri genome. Manual curation of genes in D. citri provided in-depth analysis of the yellow family among hemipteran insects and provides new targets for molecular control of this psyllid pest. Manual annotation was done as part of a collaborative Citrus Greening community annotation project. |
format | Online Article Text |
id | pubmed-9631960 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | GigaScience Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-96319602023-02-22 Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease Massimino, Crissy Vosburg, Chad Shippy, Teresa Hosmani, Prashant S. Flores-Gonzalez, Mirella Mueller, Lukas A. Hunter, Wayne B. Benoit, Joshua B. Brown, Susan J. D’Elia, Tom Saha, Surya GigaByte Data Release Huanglongbing (HLB), also known as citrus greening disease, is caused by the bacterium Candidatus Liberibacter asiaticus (CLas). It is a serious threat to global citrus production. This bacterium is transmitted by the Asian citrus psyllid, Diaphorina citri (Hemiptera). There are no effective in planta treatments for CLas. Therefore, one strategy is to manage the psyllid population. Manual annotation of the D. citri genome can identify and characterize gene families that could be novel targets for psyllid control. The yellow gene family is an excellent target because yellow genes, which have roles in melanization, are linked to development and immunity. Combined analysis of the genome with RNA-seq datasets, sequence homology, and phylogenetic trees were used to identify and annotate nine yellow genes in the D. citri genome. Manual curation of genes in D. citri provided in-depth analysis of the yellow family among hemipteran insects and provides new targets for molecular control of this psyllid pest. Manual annotation was done as part of a collaborative Citrus Greening community annotation project. GigaScience Press 2021-05-24 /pmc/articles/PMC9631960/ /pubmed/36824344 http://dx.doi.org/10.46471/gigabyte.20 Text en © The Author(s) 2021. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Data Release Massimino, Crissy Vosburg, Chad Shippy, Teresa Hosmani, Prashant S. Flores-Gonzalez, Mirella Mueller, Lukas A. Hunter, Wayne B. Benoit, Joshua B. Brown, Susan J. D’Elia, Tom Saha, Surya Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease |
title | Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease |
title_full | Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease |
title_fullStr | Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease |
title_full_unstemmed | Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease |
title_short | Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease |
title_sort | annotation of yellow genes in diaphorina citri, the vector for huanglongbing disease |
topic | Data Release |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9631960/ https://www.ncbi.nlm.nih.gov/pubmed/36824344 http://dx.doi.org/10.46471/gigabyte.20 |
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