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Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease

Huanglongbing (HLB), also known as citrus greening disease, is caused by the bacterium Candidatus Liberibacter asiaticus (CLas). It is a serious threat to global citrus production. This bacterium is transmitted by the Asian citrus psyllid, Diaphorina citri (Hemiptera). There are no effective in plan...

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Autores principales: Massimino, Crissy, Vosburg, Chad, Shippy, Teresa, Hosmani, Prashant S., Flores-Gonzalez, Mirella, Mueller, Lukas A., Hunter, Wayne B., Benoit, Joshua B., Brown, Susan J., D’Elia, Tom, Saha, Surya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: GigaScience Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9631960/
https://www.ncbi.nlm.nih.gov/pubmed/36824344
http://dx.doi.org/10.46471/gigabyte.20
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author Massimino, Crissy
Vosburg, Chad
Shippy, Teresa
Hosmani, Prashant S.
Flores-Gonzalez, Mirella
Mueller, Lukas A.
Hunter, Wayne B.
Benoit, Joshua B.
Brown, Susan J.
D’Elia, Tom
Saha, Surya
author_facet Massimino, Crissy
Vosburg, Chad
Shippy, Teresa
Hosmani, Prashant S.
Flores-Gonzalez, Mirella
Mueller, Lukas A.
Hunter, Wayne B.
Benoit, Joshua B.
Brown, Susan J.
D’Elia, Tom
Saha, Surya
author_sort Massimino, Crissy
collection PubMed
description Huanglongbing (HLB), also known as citrus greening disease, is caused by the bacterium Candidatus Liberibacter asiaticus (CLas). It is a serious threat to global citrus production. This bacterium is transmitted by the Asian citrus psyllid, Diaphorina citri (Hemiptera). There are no effective in planta treatments for CLas. Therefore, one strategy is to manage the psyllid population. Manual annotation of the D. citri genome can identify and characterize gene families that could be novel targets for psyllid control. The yellow gene family is an excellent target because yellow genes, which have roles in melanization, are linked to development and immunity. Combined analysis of the genome with RNA-seq datasets, sequence homology, and phylogenetic trees were used to identify and annotate nine yellow genes in the D. citri genome. Manual curation of genes in D. citri provided in-depth analysis of the yellow family among hemipteran insects and provides new targets for molecular control of this psyllid pest. Manual annotation was done as part of a collaborative Citrus Greening community annotation project.
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spelling pubmed-96319602023-02-22 Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease Massimino, Crissy Vosburg, Chad Shippy, Teresa Hosmani, Prashant S. Flores-Gonzalez, Mirella Mueller, Lukas A. Hunter, Wayne B. Benoit, Joshua B. Brown, Susan J. D’Elia, Tom Saha, Surya GigaByte Data Release Huanglongbing (HLB), also known as citrus greening disease, is caused by the bacterium Candidatus Liberibacter asiaticus (CLas). It is a serious threat to global citrus production. This bacterium is transmitted by the Asian citrus psyllid, Diaphorina citri (Hemiptera). There are no effective in planta treatments for CLas. Therefore, one strategy is to manage the psyllid population. Manual annotation of the D. citri genome can identify and characterize gene families that could be novel targets for psyllid control. The yellow gene family is an excellent target because yellow genes, which have roles in melanization, are linked to development and immunity. Combined analysis of the genome with RNA-seq datasets, sequence homology, and phylogenetic trees were used to identify and annotate nine yellow genes in the D. citri genome. Manual curation of genes in D. citri provided in-depth analysis of the yellow family among hemipteran insects and provides new targets for molecular control of this psyllid pest. Manual annotation was done as part of a collaborative Citrus Greening community annotation project. GigaScience Press 2021-05-24 /pmc/articles/PMC9631960/ /pubmed/36824344 http://dx.doi.org/10.46471/gigabyte.20 Text en © The Author(s) 2021. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Data Release
Massimino, Crissy
Vosburg, Chad
Shippy, Teresa
Hosmani, Prashant S.
Flores-Gonzalez, Mirella
Mueller, Lukas A.
Hunter, Wayne B.
Benoit, Joshua B.
Brown, Susan J.
D’Elia, Tom
Saha, Surya
Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
title Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
title_full Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
title_fullStr Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
title_full_unstemmed Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
title_short Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
title_sort annotation of yellow genes in diaphorina citri, the vector for huanglongbing disease
topic Data Release
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9631960/
https://www.ncbi.nlm.nih.gov/pubmed/36824344
http://dx.doi.org/10.46471/gigabyte.20
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