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Landscape of infection enhancing antibodies in COVID-19 and healthy donors

To assess the frequency of SARS-CoV-2 infection in the general population, we searched over 64 million heavy chain antibody sequences from healthy unvaccinated, healthy BNT162b2 vaccinated and COVID-19 patient repertoires for sequences similar to 11 previously reported enhancing antibodies. Although...

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Autores principales: Ismanto, Hendra S., Xu, Zichang, Saputri, Dianita S., Wilamowski, Jan, Li, Songling, Nugraha, Dendi K., Horiguchi, Yasuhiko, Okada, Masato, Arase, Hisashi, Standley, Daron M
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Research Network of Computational and Structural Biotechnology 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9635252/
https://www.ncbi.nlm.nih.gov/pubmed/36348766
http://dx.doi.org/10.1016/j.csbj.2022.11.001
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author Ismanto, Hendra S.
Xu, Zichang
Saputri, Dianita S.
Wilamowski, Jan
Li, Songling
Nugraha, Dendi K.
Horiguchi, Yasuhiko
Okada, Masato
Arase, Hisashi
Standley, Daron M
author_facet Ismanto, Hendra S.
Xu, Zichang
Saputri, Dianita S.
Wilamowski, Jan
Li, Songling
Nugraha, Dendi K.
Horiguchi, Yasuhiko
Okada, Masato
Arase, Hisashi
Standley, Daron M
author_sort Ismanto, Hendra S.
collection PubMed
description To assess the frequency of SARS-CoV-2 infection in the general population, we searched over 64 million heavy chain antibody sequences from healthy unvaccinated, healthy BNT162b2 vaccinated and COVID-19 patient repertoires for sequences similar to 11 previously reported enhancing antibodies. Although the distribution of sequence identities was similar in all three groups of repertoires, the COVID-19 and healthy vaccinated hits were significantly more clonally expanded than healthy unvaccinated hits. Furthermore, among the tested hits, 17 out of 94 from COVID-19 and 9 out of 59 from healthy vaccinated, compared with only 2 out of 96 from healthy unvaccinated, bound to the enhancing epitope. A total of 9 of the 28 epitope-binding antibodies enhanced ACE2 receptor binding to the spike protein. Together, this study revealed that infection enhancing-like antibodies are far more frequent in COVID-19 patients or healthy vaccinated donors than in healthy unvaccinated donors, but a reservoir of potential enhancing antibodies exists in healthy donors that could potentially mature to actual enhancing antibodies upon infection.
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spelling pubmed-96352522022-11-04 Landscape of infection enhancing antibodies in COVID-19 and healthy donors Ismanto, Hendra S. Xu, Zichang Saputri, Dianita S. Wilamowski, Jan Li, Songling Nugraha, Dendi K. Horiguchi, Yasuhiko Okada, Masato Arase, Hisashi Standley, Daron M Comput Struct Biotechnol J Research Article To assess the frequency of SARS-CoV-2 infection in the general population, we searched over 64 million heavy chain antibody sequences from healthy unvaccinated, healthy BNT162b2 vaccinated and COVID-19 patient repertoires for sequences similar to 11 previously reported enhancing antibodies. Although the distribution of sequence identities was similar in all three groups of repertoires, the COVID-19 and healthy vaccinated hits were significantly more clonally expanded than healthy unvaccinated hits. Furthermore, among the tested hits, 17 out of 94 from COVID-19 and 9 out of 59 from healthy vaccinated, compared with only 2 out of 96 from healthy unvaccinated, bound to the enhancing epitope. A total of 9 of the 28 epitope-binding antibodies enhanced ACE2 receptor binding to the spike protein. Together, this study revealed that infection enhancing-like antibodies are far more frequent in COVID-19 patients or healthy vaccinated donors than in healthy unvaccinated donors, but a reservoir of potential enhancing antibodies exists in healthy donors that could potentially mature to actual enhancing antibodies upon infection. Research Network of Computational and Structural Biotechnology 2022-11-04 /pmc/articles/PMC9635252/ /pubmed/36348766 http://dx.doi.org/10.1016/j.csbj.2022.11.001 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Ismanto, Hendra S.
Xu, Zichang
Saputri, Dianita S.
Wilamowski, Jan
Li, Songling
Nugraha, Dendi K.
Horiguchi, Yasuhiko
Okada, Masato
Arase, Hisashi
Standley, Daron M
Landscape of infection enhancing antibodies in COVID-19 and healthy donors
title Landscape of infection enhancing antibodies in COVID-19 and healthy donors
title_full Landscape of infection enhancing antibodies in COVID-19 and healthy donors
title_fullStr Landscape of infection enhancing antibodies in COVID-19 and healthy donors
title_full_unstemmed Landscape of infection enhancing antibodies in COVID-19 and healthy donors
title_short Landscape of infection enhancing antibodies in COVID-19 and healthy donors
title_sort landscape of infection enhancing antibodies in covid-19 and healthy donors
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9635252/
https://www.ncbi.nlm.nih.gov/pubmed/36348766
http://dx.doi.org/10.1016/j.csbj.2022.11.001
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