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Crystal structure of the second extracellular domain of human tetraspanin CD9: twinning and diffuse scattering
Remarkable features are reported in the diffraction pattern produced by a crystal of the second extracellular domain of tetraspanin CD9 (deemed CD9(EC2)), the structure of which has been described previously [Oosterheert et al. (2020 ▸), Life Sci. Alliance, 3, e202000883]. CD9(EC2) crystallized in s...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9635431/ https://www.ncbi.nlm.nih.gov/pubmed/36452441 http://dx.doi.org/10.1107/S2414314622008525 |
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author | Neviani, Viviana Lutz, Martin Oosterheert, Wout Gros, Piet Kroon-Batenburg, Loes |
author_facet | Neviani, Viviana Lutz, Martin Oosterheert, Wout Gros, Piet Kroon-Batenburg, Loes |
author_sort | Neviani, Viviana |
collection | PubMed |
description | Remarkable features are reported in the diffraction pattern produced by a crystal of the second extracellular domain of tetraspanin CD9 (deemed CD9(EC2)), the structure of which has been described previously [Oosterheert et al. (2020 ▸), Life Sci. Alliance, 3, e202000883]. CD9(EC2) crystallized in space group P1 and was twinned. Two types of diffuse streaks are observed. The stronger diffuse streaks are related to the twinning and occur in the direction perpendicular to the twinning interface. It is concluded that the twin domains scatter coherently as both Bragg reflections and diffuse streaks are seen. The weaker streaks along c* are unrelated to the twinning but are caused by intermittent layers of non-crystallographic symmetry related molecules. It is envisaged that the raw diffraction images could be very useful for methods developers trying to remove the diffuse scattering to extract accurate Bragg intensities or using it to model the effect of packing disorder on the molecular structure. [Image: see text] |
format | Online Article Text |
id | pubmed-9635431 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-96354312022-11-29 Crystal structure of the second extracellular domain of human tetraspanin CD9: twinning and diffuse scattering Neviani, Viviana Lutz, Martin Oosterheert, Wout Gros, Piet Kroon-Batenburg, Loes IUCrdata Raw Data Letters Remarkable features are reported in the diffraction pattern produced by a crystal of the second extracellular domain of tetraspanin CD9 (deemed CD9(EC2)), the structure of which has been described previously [Oosterheert et al. (2020 ▸), Life Sci. Alliance, 3, e202000883]. CD9(EC2) crystallized in space group P1 and was twinned. Two types of diffuse streaks are observed. The stronger diffuse streaks are related to the twinning and occur in the direction perpendicular to the twinning interface. It is concluded that the twin domains scatter coherently as both Bragg reflections and diffuse streaks are seen. The weaker streaks along c* are unrelated to the twinning but are caused by intermittent layers of non-crystallographic symmetry related molecules. It is envisaged that the raw diffraction images could be very useful for methods developers trying to remove the diffuse scattering to extract accurate Bragg intensities or using it to model the effect of packing disorder on the molecular structure. [Image: see text] International Union of Crystallography 2022-09-23 /pmc/articles/PMC9635431/ /pubmed/36452441 http://dx.doi.org/10.1107/S2414314622008525 Text en © Viviana Neviani et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Raw Data Letters Neviani, Viviana Lutz, Martin Oosterheert, Wout Gros, Piet Kroon-Batenburg, Loes Crystal structure of the second extracellular domain of human tetraspanin CD9: twinning and diffuse scattering |
title | Crystal structure of the second extracellular domain of human tetraspanin CD9: twinning and diffuse scattering |
title_full | Crystal structure of the second extracellular domain of human tetraspanin CD9: twinning and diffuse scattering |
title_fullStr | Crystal structure of the second extracellular domain of human tetraspanin CD9: twinning and diffuse scattering |
title_full_unstemmed | Crystal structure of the second extracellular domain of human tetraspanin CD9: twinning and diffuse scattering |
title_short | Crystal structure of the second extracellular domain of human tetraspanin CD9: twinning and diffuse scattering |
title_sort | crystal structure of the second extracellular domain of human tetraspanin cd9: twinning and diffuse scattering |
topic | Raw Data Letters |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9635431/ https://www.ncbi.nlm.nih.gov/pubmed/36452441 http://dx.doi.org/10.1107/S2414314622008525 |
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