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Prediction of axillary lymph node pathological complete response to neoadjuvant therapy using nomogram and machine learning methods
PURPOSE: To determine the feasibility of predicting the rate of an axillary lymph node pathological complete response (apCR) using nomogram and machine learning methods. METHODS: A total of 247 patients with early breast cancer (eBC), who underwent neoadjuvant therapy (NAT) were included retrospecti...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9637839/ https://www.ncbi.nlm.nih.gov/pubmed/36353547 http://dx.doi.org/10.3389/fonc.2022.1046039 |
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author | Zhou, Tianyang Yang, Mengting Wang, Mijia Han, Linlin Chen, Hong Wu, Nan Wang, Shan Wang, Xinyi Zhang, Yuting Cui, Di Jin, Feng Qin, Pan Wang, Jia |
author_facet | Zhou, Tianyang Yang, Mengting Wang, Mijia Han, Linlin Chen, Hong Wu, Nan Wang, Shan Wang, Xinyi Zhang, Yuting Cui, Di Jin, Feng Qin, Pan Wang, Jia |
author_sort | Zhou, Tianyang |
collection | PubMed |
description | PURPOSE: To determine the feasibility of predicting the rate of an axillary lymph node pathological complete response (apCR) using nomogram and machine learning methods. METHODS: A total of 247 patients with early breast cancer (eBC), who underwent neoadjuvant therapy (NAT) were included retrospectively. We compared pre- and post-NAT ultrasound information and calculated the maximum diameter change of the primary lesion (MDCPL): [(pre-NAT maximum diameter of primary lesion – post-NAT maximum diameter of preoperative primary lesion)/pre-NAT maximum diameter of primary lesion] and described the lymph node score (LNS) (1): unclear border (2), irregular morphology (3), absence of hilum (4), visible vascularity (5), cortical thickness, and (6) aspect ratio <2. Each description counted as 1 point. Logistic regression analyses were used to assess apCR independent predictors to create nomogram. The area under the curve (AUC) of the receiver operating characteristic curve as well as calibration curves were employed to assess the nomogram’s performance. In machine learning, data were trained and validated by random forest (RF) following Pycharm software and five-fold cross-validation analysis. RESULTS: The mean age of enrolled patients was 50.4 ± 10.2 years. MDCPL (odds ratio [OR], 1.013; 95% confidence interval [CI], 1.002–1.024; p=0.018), LNS changes (pre-NAT LNS – post-NAT LNS; OR, 2.790; 95% CI, 1.190–6.544; p=0.018), N stage (OR, 0.496; 95% CI, 0.269–0.915; p=0.025), and HER2 status (OR, 2.244; 95% CI, 1.147–4.392; p=0.018) were independent predictors of apCR. The AUCs of the nomogram were 0.74 (95% CI, 0.68–0.81) and 0.76 (95% CI, 0.63–0.90) for training and validation sets, respectively. In RF model, the maximum diameter of the primary lesion, axillary lymph node, and LNS in each cycle, estrogen receptor status, progesterone receptor status, HER2, Ki67, and T and N stages were included in the training set. The final validation set had an AUC value of 0.85 (95% CI, 0.74–0.87). CONCLUSION: Both nomogram and machine learning methods can predict apCR well. Nomogram is simple and practical, and shows high operability. Machine learning makes better use of a patient’s clinicopathological information. These prediction models can assist surgeons in deciding on a reasonable strategy for axillary surgery. |
format | Online Article Text |
id | pubmed-9637839 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96378392022-11-08 Prediction of axillary lymph node pathological complete response to neoadjuvant therapy using nomogram and machine learning methods Zhou, Tianyang Yang, Mengting Wang, Mijia Han, Linlin Chen, Hong Wu, Nan Wang, Shan Wang, Xinyi Zhang, Yuting Cui, Di Jin, Feng Qin, Pan Wang, Jia Front Oncol Oncology PURPOSE: To determine the feasibility of predicting the rate of an axillary lymph node pathological complete response (apCR) using nomogram and machine learning methods. METHODS: A total of 247 patients with early breast cancer (eBC), who underwent neoadjuvant therapy (NAT) were included retrospectively. We compared pre- and post-NAT ultrasound information and calculated the maximum diameter change of the primary lesion (MDCPL): [(pre-NAT maximum diameter of primary lesion – post-NAT maximum diameter of preoperative primary lesion)/pre-NAT maximum diameter of primary lesion] and described the lymph node score (LNS) (1): unclear border (2), irregular morphology (3), absence of hilum (4), visible vascularity (5), cortical thickness, and (6) aspect ratio <2. Each description counted as 1 point. Logistic regression analyses were used to assess apCR independent predictors to create nomogram. The area under the curve (AUC) of the receiver operating characteristic curve as well as calibration curves were employed to assess the nomogram’s performance. In machine learning, data were trained and validated by random forest (RF) following Pycharm software and five-fold cross-validation analysis. RESULTS: The mean age of enrolled patients was 50.4 ± 10.2 years. MDCPL (odds ratio [OR], 1.013; 95% confidence interval [CI], 1.002–1.024; p=0.018), LNS changes (pre-NAT LNS – post-NAT LNS; OR, 2.790; 95% CI, 1.190–6.544; p=0.018), N stage (OR, 0.496; 95% CI, 0.269–0.915; p=0.025), and HER2 status (OR, 2.244; 95% CI, 1.147–4.392; p=0.018) were independent predictors of apCR. The AUCs of the nomogram were 0.74 (95% CI, 0.68–0.81) and 0.76 (95% CI, 0.63–0.90) for training and validation sets, respectively. In RF model, the maximum diameter of the primary lesion, axillary lymph node, and LNS in each cycle, estrogen receptor status, progesterone receptor status, HER2, Ki67, and T and N stages were included in the training set. The final validation set had an AUC value of 0.85 (95% CI, 0.74–0.87). CONCLUSION: Both nomogram and machine learning methods can predict apCR well. Nomogram is simple and practical, and shows high operability. Machine learning makes better use of a patient’s clinicopathological information. These prediction models can assist surgeons in deciding on a reasonable strategy for axillary surgery. Frontiers Media S.A. 2022-10-24 /pmc/articles/PMC9637839/ /pubmed/36353547 http://dx.doi.org/10.3389/fonc.2022.1046039 Text en Copyright © 2022 Zhou, Yang, Wang, Han, Chen, Wu, Wang, Wang, Zhang, Cui, Jin, Qin and Wang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Zhou, Tianyang Yang, Mengting Wang, Mijia Han, Linlin Chen, Hong Wu, Nan Wang, Shan Wang, Xinyi Zhang, Yuting Cui, Di Jin, Feng Qin, Pan Wang, Jia Prediction of axillary lymph node pathological complete response to neoadjuvant therapy using nomogram and machine learning methods |
title | Prediction of axillary lymph node pathological complete response to neoadjuvant therapy using nomogram and machine learning methods |
title_full | Prediction of axillary lymph node pathological complete response to neoadjuvant therapy using nomogram and machine learning methods |
title_fullStr | Prediction of axillary lymph node pathological complete response to neoadjuvant therapy using nomogram and machine learning methods |
title_full_unstemmed | Prediction of axillary lymph node pathological complete response to neoadjuvant therapy using nomogram and machine learning methods |
title_short | Prediction of axillary lymph node pathological complete response to neoadjuvant therapy using nomogram and machine learning methods |
title_sort | prediction of axillary lymph node pathological complete response to neoadjuvant therapy using nomogram and machine learning methods |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9637839/ https://www.ncbi.nlm.nih.gov/pubmed/36353547 http://dx.doi.org/10.3389/fonc.2022.1046039 |
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