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Distribution of two-component signal transduction systems BlpRH and ComDE across streptococcal species
Two-component signal transduction (TCS) systems are important regulatory pathways in streptococci. A typical TCS encodes a membrane-anchored sensor kinase (SK) and a cytoplasmic response regulator (RR). Approximately, 20 different types of TCSs are encoded by various streptococci. Among them, two TC...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9638458/ https://www.ncbi.nlm.nih.gov/pubmed/36353461 http://dx.doi.org/10.3389/fmicb.2022.960994 |
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author | Dhaked, Hemendra Pal Singh Biswas, Indranil |
author_facet | Dhaked, Hemendra Pal Singh Biswas, Indranil |
author_sort | Dhaked, Hemendra Pal Singh |
collection | PubMed |
description | Two-component signal transduction (TCS) systems are important regulatory pathways in streptococci. A typical TCS encodes a membrane-anchored sensor kinase (SK) and a cytoplasmic response regulator (RR). Approximately, 20 different types of TCSs are encoded by various streptococci. Among them, two TCSs, in particular BlpRH and ComDE, are required for bacteriocins production and competence development. The SK component of these two TCSs is highly similar and belongs to the protein kinase-10 (HPK-10) subfamily. While these two TCSs are present in streptococci, no systematic studies have been done to differentiate between these two TCSs, and the existence of these pathways in several species of the genus Streptococcus is also unknown. The lack of information about these pathways misguided researchers for decades into believing that the Streptococcus mutans BlpRH system is a ComDE system. Here, we have attempted to distinguish between the BlpRH and ComDE systems based on the location of the chromosome, genomic arrangement, and conserved residues. Using the SyntTax and NCBI databases, we investigated the presence of both TCS systems in the genome of several streptococcal species. We noticed that the NCBI database did not have proper annotations for these pathways in several species, and many of them were wrongly annotated, such as CitS or DpiB instead of BlpH. Nevertheless, our critical analyses led us to classify streptococci into two groups: class A (only the BlpRH system) and class B (both the BlpRH and ComDE systems). Most of the streptococcal groups, including bovis, pyogenic, mutans, salivarius, and suis, encode only the BlpRH system. In contrast, only in the mitis and anginosus groups were both the TCS systems present. The focus of this review is to identify and differentiate between the BlpRH and ComDE systems, and discuss these two pathways in various streptococci. |
format | Online Article Text |
id | pubmed-9638458 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96384582022-11-08 Distribution of two-component signal transduction systems BlpRH and ComDE across streptococcal species Dhaked, Hemendra Pal Singh Biswas, Indranil Front Microbiol Microbiology Two-component signal transduction (TCS) systems are important regulatory pathways in streptococci. A typical TCS encodes a membrane-anchored sensor kinase (SK) and a cytoplasmic response regulator (RR). Approximately, 20 different types of TCSs are encoded by various streptococci. Among them, two TCSs, in particular BlpRH and ComDE, are required for bacteriocins production and competence development. The SK component of these two TCSs is highly similar and belongs to the protein kinase-10 (HPK-10) subfamily. While these two TCSs are present in streptococci, no systematic studies have been done to differentiate between these two TCSs, and the existence of these pathways in several species of the genus Streptococcus is also unknown. The lack of information about these pathways misguided researchers for decades into believing that the Streptococcus mutans BlpRH system is a ComDE system. Here, we have attempted to distinguish between the BlpRH and ComDE systems based on the location of the chromosome, genomic arrangement, and conserved residues. Using the SyntTax and NCBI databases, we investigated the presence of both TCS systems in the genome of several streptococcal species. We noticed that the NCBI database did not have proper annotations for these pathways in several species, and many of them were wrongly annotated, such as CitS or DpiB instead of BlpH. Nevertheless, our critical analyses led us to classify streptococci into two groups: class A (only the BlpRH system) and class B (both the BlpRH and ComDE systems). Most of the streptococcal groups, including bovis, pyogenic, mutans, salivarius, and suis, encode only the BlpRH system. In contrast, only in the mitis and anginosus groups were both the TCS systems present. The focus of this review is to identify and differentiate between the BlpRH and ComDE systems, and discuss these two pathways in various streptococci. Frontiers Media S.A. 2022-10-24 /pmc/articles/PMC9638458/ /pubmed/36353461 http://dx.doi.org/10.3389/fmicb.2022.960994 Text en Copyright © 2022 Dhaked and Biswas. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Dhaked, Hemendra Pal Singh Biswas, Indranil Distribution of two-component signal transduction systems BlpRH and ComDE across streptococcal species |
title | Distribution of two-component signal transduction systems BlpRH and ComDE across streptococcal species |
title_full | Distribution of two-component signal transduction systems BlpRH and ComDE across streptococcal species |
title_fullStr | Distribution of two-component signal transduction systems BlpRH and ComDE across streptococcal species |
title_full_unstemmed | Distribution of two-component signal transduction systems BlpRH and ComDE across streptococcal species |
title_short | Distribution of two-component signal transduction systems BlpRH and ComDE across streptococcal species |
title_sort | distribution of two-component signal transduction systems blprh and comde across streptococcal species |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9638458/ https://www.ncbi.nlm.nih.gov/pubmed/36353461 http://dx.doi.org/10.3389/fmicb.2022.960994 |
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