Cargando…
Duet: SNP-assisted structural variant calling and phasing using Oxford nanopore sequencing
BACKGROUND: Whole genome sequencing using the long-read Oxford Nanopore Technologies (ONT) MinION sequencer provides a cost-effective option for structural variant (SV) detection in clinical applications. Despite the advantage of using long reads, however, accurate SV calling and phasing are still c...
Autores principales: | Zhou, Yekai, Leung, Amy Wing-Sze, Ahmed, Syed Shakeel, Lam, Tak-Wah, Luo, Ruibang |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9639287/ https://www.ncbi.nlm.nih.gov/pubmed/36344913 http://dx.doi.org/10.1186/s12859-022-05025-x |
Ejemplares similares
-
Boosting variant-calling performance with multi-platform sequencing data using Clair3-MP
por: Yu, Huijing, et al.
Publicado: (2023) -
Clair3-trio: high-performance Nanopore long-read variant calling in family trios with trio-to-trio deep neural networks
por: Su, Junhao, et al.
Publicado: (2022) -
MegaGTA: a sensitive and accurate metagenomic gene-targeted assembler using iterative de Bruijn graphs
por: Li, Dinghua, et al.
Publicado: (2017) -
BoardION: real-time monitoring of Oxford Nanopore sequencing instruments
por: Bruno, Aimeric, et al.
Publicado: (2021) -
Detecting structural variations with precise breakpoints using low-depth WGS data from a single oxford nanopore MinION flowcell
por: Leung, Henry C. M., et al.
Publicado: (2022)