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Integrin subunit alpha V is a potent prognostic biomarker associated with immune infiltration in lower-grade glioma
As a member of integrin receptor family, ITGAV (integrin subunit α V) is involved in a variety of cell biological processes and overexpressed in various cancers, which may be a potential prognostic factor. However, its prognostic value and potential function in lower-grade glioma (LGG) are still unc...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9642104/ https://www.ncbi.nlm.nih.gov/pubmed/36388191 http://dx.doi.org/10.3389/fneur.2022.964590 |
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author | Tan, Zilong Zhang, Zhe Yu, Kai Yang, Huan Liang, Huaizhen Lu, Tianzhu Ji, Yulong Chen, Junjun He, Wei Chen, Zhen Mei, Yuran Shen, Xiao-Li |
author_facet | Tan, Zilong Zhang, Zhe Yu, Kai Yang, Huan Liang, Huaizhen Lu, Tianzhu Ji, Yulong Chen, Junjun He, Wei Chen, Zhen Mei, Yuran Shen, Xiao-Li |
author_sort | Tan, Zilong |
collection | PubMed |
description | As a member of integrin receptor family, ITGAV (integrin subunit α V) is involved in a variety of cell biological processes and overexpressed in various cancers, which may be a potential prognostic factor. However, its prognostic value and potential function in lower-grade glioma (LGG) are still unclear, and in terms of immune infiltration, it has not been fully elucidated. Here, the expression preference, prognostic value, and clinical traits of ITGAV were investigated using The Cancer Genome Atlas database (n = 528) and the Chinese Glioma Genome Atlas dataset (n = 458). Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses and gene set enrichment analysis (GSEA) were used to explore the biological function of ITGAV. Using R package “ssGSEA” analysis, it was found thatthe ITGAV mRNA expression level showed intense correlation with tumor immunity, such as tumor-infiltrating immune cells and multiple immune-related genes. In addition, ITGAV is associated with some immune checkpoints and immune checkpoint blockade (ICB) and response to chemotherapy. and the expression of ITGAV protein in LGG patients was verified via immunohistochemistry (IHC). ITGAV expression was higher in LGG tissues than in normal tissues (P < 0.001) and multifactor analysis showed that ITGAV mRNA expression was an independent prognostic factor for LGG overall survival (OS; hazard ratio = 2.113, 95% confidence interval = 1.393–3.204, P < 0.001). GSEA showed that ITGAV expression was correlated with Inflammatory response, complement response, KRAS signal, and interferon response. ssGSEA results showed a positive correlation between ITGAV expression and Th2 cell infiltration level. ITGAV mRNA was overexpressed in LGG, and high ITGAV mRNA levels were found to be associated with poor protein expression and poor OS. ITGAV is therefore a potential biomarker for the diagnosis and prognosis of LGG and may be a potential immunotherapy target. |
format | Online Article Text |
id | pubmed-9642104 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96421042022-11-15 Integrin subunit alpha V is a potent prognostic biomarker associated with immune infiltration in lower-grade glioma Tan, Zilong Zhang, Zhe Yu, Kai Yang, Huan Liang, Huaizhen Lu, Tianzhu Ji, Yulong Chen, Junjun He, Wei Chen, Zhen Mei, Yuran Shen, Xiao-Li Front Neurol Neurology As a member of integrin receptor family, ITGAV (integrin subunit α V) is involved in a variety of cell biological processes and overexpressed in various cancers, which may be a potential prognostic factor. However, its prognostic value and potential function in lower-grade glioma (LGG) are still unclear, and in terms of immune infiltration, it has not been fully elucidated. Here, the expression preference, prognostic value, and clinical traits of ITGAV were investigated using The Cancer Genome Atlas database (n = 528) and the Chinese Glioma Genome Atlas dataset (n = 458). Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses and gene set enrichment analysis (GSEA) were used to explore the biological function of ITGAV. Using R package “ssGSEA” analysis, it was found thatthe ITGAV mRNA expression level showed intense correlation with tumor immunity, such as tumor-infiltrating immune cells and multiple immune-related genes. In addition, ITGAV is associated with some immune checkpoints and immune checkpoint blockade (ICB) and response to chemotherapy. and the expression of ITGAV protein in LGG patients was verified via immunohistochemistry (IHC). ITGAV expression was higher in LGG tissues than in normal tissues (P < 0.001) and multifactor analysis showed that ITGAV mRNA expression was an independent prognostic factor for LGG overall survival (OS; hazard ratio = 2.113, 95% confidence interval = 1.393–3.204, P < 0.001). GSEA showed that ITGAV expression was correlated with Inflammatory response, complement response, KRAS signal, and interferon response. ssGSEA results showed a positive correlation between ITGAV expression and Th2 cell infiltration level. ITGAV mRNA was overexpressed in LGG, and high ITGAV mRNA levels were found to be associated with poor protein expression and poor OS. ITGAV is therefore a potential biomarker for the diagnosis and prognosis of LGG and may be a potential immunotherapy target. Frontiers Media S.A. 2022-10-25 /pmc/articles/PMC9642104/ /pubmed/36388191 http://dx.doi.org/10.3389/fneur.2022.964590 Text en Copyright © 2022 Tan, Zhang, Yu, Yang, Liang, Lu, Ji, Chen, He, Chen, Mei and Shen. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neurology Tan, Zilong Zhang, Zhe Yu, Kai Yang, Huan Liang, Huaizhen Lu, Tianzhu Ji, Yulong Chen, Junjun He, Wei Chen, Zhen Mei, Yuran Shen, Xiao-Li Integrin subunit alpha V is a potent prognostic biomarker associated with immune infiltration in lower-grade glioma |
title | Integrin subunit alpha V is a potent prognostic biomarker associated with immune infiltration in lower-grade glioma |
title_full | Integrin subunit alpha V is a potent prognostic biomarker associated with immune infiltration in lower-grade glioma |
title_fullStr | Integrin subunit alpha V is a potent prognostic biomarker associated with immune infiltration in lower-grade glioma |
title_full_unstemmed | Integrin subunit alpha V is a potent prognostic biomarker associated with immune infiltration in lower-grade glioma |
title_short | Integrin subunit alpha V is a potent prognostic biomarker associated with immune infiltration in lower-grade glioma |
title_sort | integrin subunit alpha v is a potent prognostic biomarker associated with immune infiltration in lower-grade glioma |
topic | Neurology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9642104/ https://www.ncbi.nlm.nih.gov/pubmed/36388191 http://dx.doi.org/10.3389/fneur.2022.964590 |
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