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Prediction of East Asian Brain Age using Machine Learning Algorithms Trained With Community-based Healthy Brain MRI

BACKGROUND AND PURPOSE: Magnetic resonance imaging (MRI) helps with brain development analysis and disease diagnosis. Brain volumes measured from different ages using MRI provides useful information in clinical evaluation and research. Therefore, we trained machine learning models that predict the b...

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Autores principales: Simfukwe, Chanda, Youn, Young Chul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Dementia Association 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9644058/
https://www.ncbi.nlm.nih.gov/pubmed/36407289
http://dx.doi.org/10.12779/dnd.2022.21.4.138
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author Simfukwe, Chanda
Youn, Young Chul
author_facet Simfukwe, Chanda
Youn, Young Chul
author_sort Simfukwe, Chanda
collection PubMed
description BACKGROUND AND PURPOSE: Magnetic resonance imaging (MRI) helps with brain development analysis and disease diagnosis. Brain volumes measured from different ages using MRI provides useful information in clinical evaluation and research. Therefore, we trained machine learning models that predict the brain age gap of healthy subjects in the East Asian population using T1 brain MRI volume images. METHODS: In total, 154 T1-weighted MRIs of healthy subjects (55–83 years of age) were collected from an East Asian community. The information of age, gender, and education level was collected for each participant. The MRIs of the participants were preprocessed using FreeSurfer (https://surfer.nmr.mgh.harvard.edu/) to collect the brain volume data. We trained the models using different supervised machine learning regression algorithms from the scikit-learn (https://scikit-learn.org/) library. RESULTS: The trained models comprised 19 features that had been reduced from 55 brain volume labels. The algorithm BayesianRidge (BR) achieved a mean absolute error (MAE) and r squared (R(2)) of 3 and 0.3 years, respectively, in predicting the age of the new subjects compared to other regression methods. The results of feature importance analysis showed that the right pallidum, white matter hypointensities on T1-MRI scans, and left hippocampus comprise some of the essential features in predicting brain age. CONCLUSIONS: The MAE and R(2) accuracies of the BR model predicting brain age gap in the East Asian population showed that the model could reduce the dimensionality of neuroimaging data to provide a meaningful biomarker for individual brain aging.
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spelling pubmed-96440582022-11-18 Prediction of East Asian Brain Age using Machine Learning Algorithms Trained With Community-based Healthy Brain MRI Simfukwe, Chanda Youn, Young Chul Dement Neurocogn Disord Original Article BACKGROUND AND PURPOSE: Magnetic resonance imaging (MRI) helps with brain development analysis and disease diagnosis. Brain volumes measured from different ages using MRI provides useful information in clinical evaluation and research. Therefore, we trained machine learning models that predict the brain age gap of healthy subjects in the East Asian population using T1 brain MRI volume images. METHODS: In total, 154 T1-weighted MRIs of healthy subjects (55–83 years of age) were collected from an East Asian community. The information of age, gender, and education level was collected for each participant. The MRIs of the participants were preprocessed using FreeSurfer (https://surfer.nmr.mgh.harvard.edu/) to collect the brain volume data. We trained the models using different supervised machine learning regression algorithms from the scikit-learn (https://scikit-learn.org/) library. RESULTS: The trained models comprised 19 features that had been reduced from 55 brain volume labels. The algorithm BayesianRidge (BR) achieved a mean absolute error (MAE) and r squared (R(2)) of 3 and 0.3 years, respectively, in predicting the age of the new subjects compared to other regression methods. The results of feature importance analysis showed that the right pallidum, white matter hypointensities on T1-MRI scans, and left hippocampus comprise some of the essential features in predicting brain age. CONCLUSIONS: The MAE and R(2) accuracies of the BR model predicting brain age gap in the East Asian population showed that the model could reduce the dimensionality of neuroimaging data to provide a meaningful biomarker for individual brain aging. Korean Dementia Association 2022-10 2022-10-31 /pmc/articles/PMC9644058/ /pubmed/36407289 http://dx.doi.org/10.12779/dnd.2022.21.4.138 Text en © 2022 Korean Dementia Association https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Simfukwe, Chanda
Youn, Young Chul
Prediction of East Asian Brain Age using Machine Learning Algorithms Trained With Community-based Healthy Brain MRI
title Prediction of East Asian Brain Age using Machine Learning Algorithms Trained With Community-based Healthy Brain MRI
title_full Prediction of East Asian Brain Age using Machine Learning Algorithms Trained With Community-based Healthy Brain MRI
title_fullStr Prediction of East Asian Brain Age using Machine Learning Algorithms Trained With Community-based Healthy Brain MRI
title_full_unstemmed Prediction of East Asian Brain Age using Machine Learning Algorithms Trained With Community-based Healthy Brain MRI
title_short Prediction of East Asian Brain Age using Machine Learning Algorithms Trained With Community-based Healthy Brain MRI
title_sort prediction of east asian brain age using machine learning algorithms trained with community-based healthy brain mri
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9644058/
https://www.ncbi.nlm.nih.gov/pubmed/36407289
http://dx.doi.org/10.12779/dnd.2022.21.4.138
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