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Modelling multiple time-scales with flexible parametric survival models

BACKGROUND: There are situations when we need to model multiple time-scales in survival analysis. A usual approach in this setting would involve fitting Cox or Poisson models to a time-split dataset. However, this leads to large datasets and can be computationally intensive when model fitting, espec...

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Autores principales: Batyrbekova, Nurgul, Bower, Hannah, Dickman, Paul W., Ravn Landtblom, Anna, Hultcrantz, Malin, Szulkin, Robert, Lambert, Paul C., Andersson, Therese M-L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9644623/
https://www.ncbi.nlm.nih.gov/pubmed/36352351
http://dx.doi.org/10.1186/s12874-022-01773-9
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author Batyrbekova, Nurgul
Bower, Hannah
Dickman, Paul W.
Ravn Landtblom, Anna
Hultcrantz, Malin
Szulkin, Robert
Lambert, Paul C.
Andersson, Therese M-L.
author_facet Batyrbekova, Nurgul
Bower, Hannah
Dickman, Paul W.
Ravn Landtblom, Anna
Hultcrantz, Malin
Szulkin, Robert
Lambert, Paul C.
Andersson, Therese M-L.
author_sort Batyrbekova, Nurgul
collection PubMed
description BACKGROUND: There are situations when we need to model multiple time-scales in survival analysis. A usual approach in this setting would involve fitting Cox or Poisson models to a time-split dataset. However, this leads to large datasets and can be computationally intensive when model fitting, especially if interest lies in displaying how the estimated hazard rate or survival change along multiple time-scales continuously. METHODS: We propose to use flexible parametric survival models on the log hazard scale as an alternative method when modelling data with multiple time-scales. By choosing one of the time-scales as reference, and rewriting other time-scales as a function of this reference time-scale, users can avoid time-splitting of the data. RESULT: Through case-studies we demonstrate the usefulness of this method and provide examples of graphical representations of estimated hazard rates and survival proportions. The model gives nearly identical results to using a Poisson model, without requiring time-splitting. CONCLUSION: Flexible parametric survival models are a powerful tool for modelling multiple time-scales. This method does not require splitting the data into small time-intervals, and therefore saves time, helps avoid technological limitations and reduces room for error. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-022-01773-9.
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spelling pubmed-96446232022-11-15 Modelling multiple time-scales with flexible parametric survival models Batyrbekova, Nurgul Bower, Hannah Dickman, Paul W. Ravn Landtblom, Anna Hultcrantz, Malin Szulkin, Robert Lambert, Paul C. Andersson, Therese M-L. BMC Med Res Methodol Research BACKGROUND: There are situations when we need to model multiple time-scales in survival analysis. A usual approach in this setting would involve fitting Cox or Poisson models to a time-split dataset. However, this leads to large datasets and can be computationally intensive when model fitting, especially if interest lies in displaying how the estimated hazard rate or survival change along multiple time-scales continuously. METHODS: We propose to use flexible parametric survival models on the log hazard scale as an alternative method when modelling data with multiple time-scales. By choosing one of the time-scales as reference, and rewriting other time-scales as a function of this reference time-scale, users can avoid time-splitting of the data. RESULT: Through case-studies we demonstrate the usefulness of this method and provide examples of graphical representations of estimated hazard rates and survival proportions. The model gives nearly identical results to using a Poisson model, without requiring time-splitting. CONCLUSION: Flexible parametric survival models are a powerful tool for modelling multiple time-scales. This method does not require splitting the data into small time-intervals, and therefore saves time, helps avoid technological limitations and reduces room for error. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-022-01773-9. BioMed Central 2022-11-09 /pmc/articles/PMC9644623/ /pubmed/36352351 http://dx.doi.org/10.1186/s12874-022-01773-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Batyrbekova, Nurgul
Bower, Hannah
Dickman, Paul W.
Ravn Landtblom, Anna
Hultcrantz, Malin
Szulkin, Robert
Lambert, Paul C.
Andersson, Therese M-L.
Modelling multiple time-scales with flexible parametric survival models
title Modelling multiple time-scales with flexible parametric survival models
title_full Modelling multiple time-scales with flexible parametric survival models
title_fullStr Modelling multiple time-scales with flexible parametric survival models
title_full_unstemmed Modelling multiple time-scales with flexible parametric survival models
title_short Modelling multiple time-scales with flexible parametric survival models
title_sort modelling multiple time-scales with flexible parametric survival models
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9644623/
https://www.ncbi.nlm.nih.gov/pubmed/36352351
http://dx.doi.org/10.1186/s12874-022-01773-9
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