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CircRNA and miRNA expression analysis in livers of mice with Toxoplasma gondii infection
Toxoplasmosis is an important zoonotic parasitic disease caused by Toxoplasma gondii (T. gondii). However, the functions of circRNAs and miRNAs in response to T. gondii infection in the livers of mice at acute and chronic stages remain unknown. Here, high-throughput RNA sequencing was performed for...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9646959/ https://www.ncbi.nlm.nih.gov/pubmed/36389171 http://dx.doi.org/10.3389/fcimb.2022.1037586 |
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author | Zou, Yang Meng, Jin-Xin Wei, Xin-Yu Gu, Xiao-Yi Chen, Chao Geng, Hong-Li Yang, Li-Hua Zhang, Xiao-Xuan Cao, Hong-Wei |
author_facet | Zou, Yang Meng, Jin-Xin Wei, Xin-Yu Gu, Xiao-Yi Chen, Chao Geng, Hong-Li Yang, Li-Hua Zhang, Xiao-Xuan Cao, Hong-Wei |
author_sort | Zou, Yang |
collection | PubMed |
description | Toxoplasmosis is an important zoonotic parasitic disease caused by Toxoplasma gondii (T. gondii). However, the functions of circRNAs and miRNAs in response to T. gondii infection in the livers of mice at acute and chronic stages remain unknown. Here, high-throughput RNA sequencing was performed for detecting the expression of circRNAs and miRNAs in livers of mice infected with 20 T. gondii cysts at the acute and chronic stages, in order to understand the potential molecular mechanisms underlying hepatic toxoplasmosis. Overall, 265 and 97 differentially expressed (DE) circRNAs were found in livers at the acute and chronic infection stages in comparison with controls, respectively. In addition, 171 and 77 DEmiRNAs were found in livers at the acute and chronic infection stages, respectively. Functional annotation showed that some immunity-related Gene ontology terms, such as “positive regulation of cytokine production”, “regulation of T cell activation”, and “immune receptor activity”, were enriched at the two infection stages. Moreover, the pathways “Valine, leucine, and isoleucine degradation”, “Fatty acid metabolism”, and “Glycine, serine, and threonine metabolism” were involved in liver disease. Remarkably, DEcircRNA 6:124519352|124575359 was significantly correlated with DEmiRNAs mmu-miR-146a-5p and mmu-miR-150-5p in the network that was associated with liver immunity and pathogenesis of disease. This study revealed that the expression profiling of circRNAs in the livers was changed after T. gondii infection, and improved our understanding of the transcriptomic landscape of hepatic toxoplasmosis in mice. |
format | Online Article Text |
id | pubmed-9646959 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96469592022-11-15 CircRNA and miRNA expression analysis in livers of mice with Toxoplasma gondii infection Zou, Yang Meng, Jin-Xin Wei, Xin-Yu Gu, Xiao-Yi Chen, Chao Geng, Hong-Li Yang, Li-Hua Zhang, Xiao-Xuan Cao, Hong-Wei Front Cell Infect Microbiol Cellular and Infection Microbiology Toxoplasmosis is an important zoonotic parasitic disease caused by Toxoplasma gondii (T. gondii). However, the functions of circRNAs and miRNAs in response to T. gondii infection in the livers of mice at acute and chronic stages remain unknown. Here, high-throughput RNA sequencing was performed for detecting the expression of circRNAs and miRNAs in livers of mice infected with 20 T. gondii cysts at the acute and chronic stages, in order to understand the potential molecular mechanisms underlying hepatic toxoplasmosis. Overall, 265 and 97 differentially expressed (DE) circRNAs were found in livers at the acute and chronic infection stages in comparison with controls, respectively. In addition, 171 and 77 DEmiRNAs were found in livers at the acute and chronic infection stages, respectively. Functional annotation showed that some immunity-related Gene ontology terms, such as “positive regulation of cytokine production”, “regulation of T cell activation”, and “immune receptor activity”, were enriched at the two infection stages. Moreover, the pathways “Valine, leucine, and isoleucine degradation”, “Fatty acid metabolism”, and “Glycine, serine, and threonine metabolism” were involved in liver disease. Remarkably, DEcircRNA 6:124519352|124575359 was significantly correlated with DEmiRNAs mmu-miR-146a-5p and mmu-miR-150-5p in the network that was associated with liver immunity and pathogenesis of disease. This study revealed that the expression profiling of circRNAs in the livers was changed after T. gondii infection, and improved our understanding of the transcriptomic landscape of hepatic toxoplasmosis in mice. Frontiers Media S.A. 2022-10-27 /pmc/articles/PMC9646959/ /pubmed/36389171 http://dx.doi.org/10.3389/fcimb.2022.1037586 Text en Copyright © 2022 Zou, Meng, Wei, Gu, Chen, Geng, Yang, Zhang and Cao https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Cellular and Infection Microbiology Zou, Yang Meng, Jin-Xin Wei, Xin-Yu Gu, Xiao-Yi Chen, Chao Geng, Hong-Li Yang, Li-Hua Zhang, Xiao-Xuan Cao, Hong-Wei CircRNA and miRNA expression analysis in livers of mice with Toxoplasma gondii infection |
title | CircRNA and miRNA expression analysis in livers of mice with Toxoplasma gondii infection |
title_full | CircRNA and miRNA expression analysis in livers of mice with Toxoplasma gondii infection |
title_fullStr | CircRNA and miRNA expression analysis in livers of mice with Toxoplasma gondii infection |
title_full_unstemmed | CircRNA and miRNA expression analysis in livers of mice with Toxoplasma gondii infection |
title_short | CircRNA and miRNA expression analysis in livers of mice with Toxoplasma gondii infection |
title_sort | circrna and mirna expression analysis in livers of mice with toxoplasma gondii infection |
topic | Cellular and Infection Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9646959/ https://www.ncbi.nlm.nih.gov/pubmed/36389171 http://dx.doi.org/10.3389/fcimb.2022.1037586 |
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