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CRISPR/Cas-Based Biosensor As a New Age Detection Method for Pathogenic Bacteria

[Image: see text] Methods enabling rapid and on-site detection of pathogenic bacteria are a prerequisite for public health assurance, medical diagnostics, ensuring food safety and security, and research. Many current bacteria detection technologies are inconvenient and time-consuming, making them un...

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Autores principales: Chakraborty, Joydeep, Chaudhary, Anis Ahmad, Khan, Salah-Ud-Din, Rudayni, Hassan Ahmad, Rahaman, Sayed Modinur, Sarkar, Hironmoy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9648122/
https://www.ncbi.nlm.nih.gov/pubmed/36385843
http://dx.doi.org/10.1021/acsomega.2c04513
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author Chakraborty, Joydeep
Chaudhary, Anis Ahmad
Khan, Salah-Ud-Din
Rudayni, Hassan Ahmad
Rahaman, Sayed Modinur
Sarkar, Hironmoy
author_facet Chakraborty, Joydeep
Chaudhary, Anis Ahmad
Khan, Salah-Ud-Din
Rudayni, Hassan Ahmad
Rahaman, Sayed Modinur
Sarkar, Hironmoy
author_sort Chakraborty, Joydeep
collection PubMed
description [Image: see text] Methods enabling rapid and on-site detection of pathogenic bacteria are a prerequisite for public health assurance, medical diagnostics, ensuring food safety and security, and research. Many current bacteria detection technologies are inconvenient and time-consuming, making them unsuitable for field detection. New technology based on the CRISPR/Cas system has the potential to fill the existing gaps in detection. The clustered regularly interspaced short palindromic repeats (CRISPR) system is a part of the bacterial adaptive immune system to protect them from intruding bacteriophages. The immunological memory is saved by the CRISPR array of bacteria in the form of short DNA sequences (spacers) from invading viruses and incorporated with the CRISPR DNA repeats. Cas proteins are responsible for triggering and initiating the adaptive immune function of CRISPR/Cas systems. In advanced biological research, the CRISPR/Cas system has emerged as a significant tool from genome editing to pathogen detection. By considering its sensitivity and specificity, this system can become one of the leading detection methods for targeting DNA/RNA. This technique is well applied in virus detection like Dengue, ZIKA, SARS-CoV-2, etc., but for bacterial detection, this CRISPR/Cas system is limited to only a few organisms to date. In this review, we have discussed the different techniques based on the CRISPR/Cas system that have been developed for the detection of various pathogenic bacteria like L. monocytogenes, M. tuberculosis, Methicillin-resistant S. aureus, Salmonella, E. coli, P. aeruginosa, and A. baumannii.
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spelling pubmed-96481222022-11-15 CRISPR/Cas-Based Biosensor As a New Age Detection Method for Pathogenic Bacteria Chakraborty, Joydeep Chaudhary, Anis Ahmad Khan, Salah-Ud-Din Rudayni, Hassan Ahmad Rahaman, Sayed Modinur Sarkar, Hironmoy ACS Omega [Image: see text] Methods enabling rapid and on-site detection of pathogenic bacteria are a prerequisite for public health assurance, medical diagnostics, ensuring food safety and security, and research. Many current bacteria detection technologies are inconvenient and time-consuming, making them unsuitable for field detection. New technology based on the CRISPR/Cas system has the potential to fill the existing gaps in detection. The clustered regularly interspaced short palindromic repeats (CRISPR) system is a part of the bacterial adaptive immune system to protect them from intruding bacteriophages. The immunological memory is saved by the CRISPR array of bacteria in the form of short DNA sequences (spacers) from invading viruses and incorporated with the CRISPR DNA repeats. Cas proteins are responsible for triggering and initiating the adaptive immune function of CRISPR/Cas systems. In advanced biological research, the CRISPR/Cas system has emerged as a significant tool from genome editing to pathogen detection. By considering its sensitivity and specificity, this system can become one of the leading detection methods for targeting DNA/RNA. This technique is well applied in virus detection like Dengue, ZIKA, SARS-CoV-2, etc., but for bacterial detection, this CRISPR/Cas system is limited to only a few organisms to date. In this review, we have discussed the different techniques based on the CRISPR/Cas system that have been developed for the detection of various pathogenic bacteria like L. monocytogenes, M. tuberculosis, Methicillin-resistant S. aureus, Salmonella, E. coli, P. aeruginosa, and A. baumannii. American Chemical Society 2022-10-18 /pmc/articles/PMC9648122/ /pubmed/36385843 http://dx.doi.org/10.1021/acsomega.2c04513 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Chakraborty, Joydeep
Chaudhary, Anis Ahmad
Khan, Salah-Ud-Din
Rudayni, Hassan Ahmad
Rahaman, Sayed Modinur
Sarkar, Hironmoy
CRISPR/Cas-Based Biosensor As a New Age Detection Method for Pathogenic Bacteria
title CRISPR/Cas-Based Biosensor As a New Age Detection Method for Pathogenic Bacteria
title_full CRISPR/Cas-Based Biosensor As a New Age Detection Method for Pathogenic Bacteria
title_fullStr CRISPR/Cas-Based Biosensor As a New Age Detection Method for Pathogenic Bacteria
title_full_unstemmed CRISPR/Cas-Based Biosensor As a New Age Detection Method for Pathogenic Bacteria
title_short CRISPR/Cas-Based Biosensor As a New Age Detection Method for Pathogenic Bacteria
title_sort crispr/cas-based biosensor as a new age detection method for pathogenic bacteria
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9648122/
https://www.ncbi.nlm.nih.gov/pubmed/36385843
http://dx.doi.org/10.1021/acsomega.2c04513
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