Cargando…
Newton-X Platform: New Software Developments for Surface Hopping and Nuclear Ensembles
[Image: see text] Newton-X is an open-source computational platform to perform nonadiabatic molecular dynamics based on surface hopping and spectrum simulations using the nuclear ensemble approach. Both are among the most common methodologies in computational chemistry for photophysical and photoche...
Autores principales: | , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9648185/ https://www.ncbi.nlm.nih.gov/pubmed/36194696 http://dx.doi.org/10.1021/acs.jctc.2c00804 |
_version_ | 1784827522965307392 |
---|---|
author | Barbatti, Mario Bondanza, Mattia Crespo-Otero, Rachel Demoulin, Baptiste Dral, Pavlo O. Granucci, Giovanni Kossoski, Fábris Lischka, Hans Mennucci, Benedetta Mukherjee, Saikat Pederzoli, Marek Persico, Maurizio Pinheiro Jr, Max Pittner, Jiří Plasser, Felix Sangiogo Gil, Eduarda Stojanovic, Ljiljana |
author_facet | Barbatti, Mario Bondanza, Mattia Crespo-Otero, Rachel Demoulin, Baptiste Dral, Pavlo O. Granucci, Giovanni Kossoski, Fábris Lischka, Hans Mennucci, Benedetta Mukherjee, Saikat Pederzoli, Marek Persico, Maurizio Pinheiro Jr, Max Pittner, Jiří Plasser, Felix Sangiogo Gil, Eduarda Stojanovic, Ljiljana |
author_sort | Barbatti, Mario |
collection | PubMed |
description | [Image: see text] Newton-X is an open-source computational platform to perform nonadiabatic molecular dynamics based on surface hopping and spectrum simulations using the nuclear ensemble approach. Both are among the most common methodologies in computational chemistry for photophysical and photochemical investigations. This paper describes the main features of these methods and how they are implemented in Newton-X. It emphasizes the newest developments, including zero-point-energy leakage correction, dynamics on complex-valued potential energy surfaces, dynamics induced by incoherent light, dynamics based on machine-learning potentials, exciton dynamics of multiple chromophores, and supervised and unsupervised machine learning techniques. Newton-X is interfaced with several third-party quantum-chemistry programs, spanning a broad spectrum of electronic structure methods. |
format | Online Article Text |
id | pubmed-9648185 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-96481852022-11-15 Newton-X Platform: New Software Developments for Surface Hopping and Nuclear Ensembles Barbatti, Mario Bondanza, Mattia Crespo-Otero, Rachel Demoulin, Baptiste Dral, Pavlo O. Granucci, Giovanni Kossoski, Fábris Lischka, Hans Mennucci, Benedetta Mukherjee, Saikat Pederzoli, Marek Persico, Maurizio Pinheiro Jr, Max Pittner, Jiří Plasser, Felix Sangiogo Gil, Eduarda Stojanovic, Ljiljana J Chem Theory Comput [Image: see text] Newton-X is an open-source computational platform to perform nonadiabatic molecular dynamics based on surface hopping and spectrum simulations using the nuclear ensemble approach. Both are among the most common methodologies in computational chemistry for photophysical and photochemical investigations. This paper describes the main features of these methods and how they are implemented in Newton-X. It emphasizes the newest developments, including zero-point-energy leakage correction, dynamics on complex-valued potential energy surfaces, dynamics induced by incoherent light, dynamics based on machine-learning potentials, exciton dynamics of multiple chromophores, and supervised and unsupervised machine learning techniques. Newton-X is interfaced with several third-party quantum-chemistry programs, spanning a broad spectrum of electronic structure methods. American Chemical Society 2022-10-04 2022-11-08 /pmc/articles/PMC9648185/ /pubmed/36194696 http://dx.doi.org/10.1021/acs.jctc.2c00804 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Barbatti, Mario Bondanza, Mattia Crespo-Otero, Rachel Demoulin, Baptiste Dral, Pavlo O. Granucci, Giovanni Kossoski, Fábris Lischka, Hans Mennucci, Benedetta Mukherjee, Saikat Pederzoli, Marek Persico, Maurizio Pinheiro Jr, Max Pittner, Jiří Plasser, Felix Sangiogo Gil, Eduarda Stojanovic, Ljiljana Newton-X Platform: New Software Developments for Surface Hopping and Nuclear Ensembles |
title | Newton-X
Platform: New Software Developments
for Surface Hopping and Nuclear Ensembles |
title_full | Newton-X
Platform: New Software Developments
for Surface Hopping and Nuclear Ensembles |
title_fullStr | Newton-X
Platform: New Software Developments
for Surface Hopping and Nuclear Ensembles |
title_full_unstemmed | Newton-X
Platform: New Software Developments
for Surface Hopping and Nuclear Ensembles |
title_short | Newton-X
Platform: New Software Developments
for Surface Hopping and Nuclear Ensembles |
title_sort | newton-x
platform: new software developments
for surface hopping and nuclear ensembles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9648185/ https://www.ncbi.nlm.nih.gov/pubmed/36194696 http://dx.doi.org/10.1021/acs.jctc.2c00804 |
work_keys_str_mv | AT barbattimario newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT bondanzamattia newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT crespooterorachel newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT demoulinbaptiste newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT dralpavloo newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT granuccigiovanni newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT kossoskifabris newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT lischkahans newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT mennuccibenedetta newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT mukherjeesaikat newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT pederzolimarek newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT persicomaurizio newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT pinheirojrmax newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT pittnerjiri newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT plasserfelix newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT sangiogogileduarda newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles AT stojanovicljiljana newtonxplatformnewsoftwaredevelopmentsforsurfacehoppingandnuclearensembles |