The complete genome sequences of Erythroxylum coca and Erythroxylum novogranatense

The flowering plant genus Erythroxylum contains approximately 300 species, including the economically and socially consequential crops called coca. We present the genome sequences of Erythroxylum coca and E. novogranatense, two cultigens produced for medicinal and quotidian use in the Andes and Amaz...

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Autores principales: White, Dawson, Meinhardt, Lyndel, Bailey, Bryan, Pirro, Stacy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2022
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9648698/
https://www.ncbi.nlm.nih.gov/pubmed/36381538
http://dx.doi.org/10.56179/001c.39776
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author White, Dawson
Meinhardt, Lyndel
Bailey, Bryan
Pirro, Stacy
author_facet White, Dawson
Meinhardt, Lyndel
Bailey, Bryan
Pirro, Stacy
author_sort White, Dawson
collection PubMed
description The flowering plant genus Erythroxylum contains approximately 300 species, including the economically and socially consequential crops called coca. We present the genome sequences of Erythroxylum coca and E. novogranatense, two cultigens produced for medicinal and quotidian use in the Andes and Amazon regions of South America, as well as the international cocaine industry. Sequencing was performed on an Illumina X-Ten platform, and reads were assembled by a de novo method followed by finishing via comparison with several species from the same genus. The BioProject, raw and assembled data can be accessed in GenBank for E. coca (PRJNA676123; JAJMLV000000000) and E. novogranatense (PRJNA675212; JAJKBF000000000).
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spelling pubmed-96486982022-11-14 The complete genome sequences of Erythroxylum coca and Erythroxylum novogranatense White, Dawson Meinhardt, Lyndel Bailey, Bryan Pirro, Stacy Biodivers Genomes Article The flowering plant genus Erythroxylum contains approximately 300 species, including the economically and socially consequential crops called coca. We present the genome sequences of Erythroxylum coca and E. novogranatense, two cultigens produced for medicinal and quotidian use in the Andes and Amazon regions of South America, as well as the international cocaine industry. Sequencing was performed on an Illumina X-Ten platform, and reads were assembled by a de novo method followed by finishing via comparison with several species from the same genus. The BioProject, raw and assembled data can be accessed in GenBank for E. coca (PRJNA676123; JAJMLV000000000) and E. novogranatense (PRJNA675212; JAJKBF000000000). 2022 2022-10-29 /pmc/articles/PMC9648698/ /pubmed/36381538 http://dx.doi.org/10.56179/001c.39776 Text en https://creativecommons.org/licenses/by-sa/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (CCBY-SA-4.0). View this license’s legal deed at https://creativecommons.org/licenses/by-sa/4.0 (https://creativecommons.org/licenses/by-sa/4.0/) and legal code at https://creativecommons.org/licenses/by-sa/4.0/legalcode (https://creativecommons.org/licenses/by-sa/4.0/) for more information.
spellingShingle Article
White, Dawson
Meinhardt, Lyndel
Bailey, Bryan
Pirro, Stacy
The complete genome sequences of Erythroxylum coca and Erythroxylum novogranatense
title The complete genome sequences of Erythroxylum coca and Erythroxylum novogranatense
title_full The complete genome sequences of Erythroxylum coca and Erythroxylum novogranatense
title_fullStr The complete genome sequences of Erythroxylum coca and Erythroxylum novogranatense
title_full_unstemmed The complete genome sequences of Erythroxylum coca and Erythroxylum novogranatense
title_short The complete genome sequences of Erythroxylum coca and Erythroxylum novogranatense
title_sort complete genome sequences of erythroxylum coca and erythroxylum novogranatense
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9648698/
https://www.ncbi.nlm.nih.gov/pubmed/36381538
http://dx.doi.org/10.56179/001c.39776
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