Cargando…
Comprehensive analysis of prognostic significance of cadherin (CDH) gene family in breast cancer
Breast cancer is one of the leading deaths in all kinds of malignancies; therefore, it is important for early detection. At the primary tumor site, tumor cells could take on mesenchymal properties, termed the epithelial-to-mesenchymal transition (EMT). This process is partly regulated by members of...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9648792/ https://www.ncbi.nlm.nih.gov/pubmed/36315446 http://dx.doi.org/10.18632/aging.204357 |
_version_ | 1784827655468613632 |
---|---|
author | Ku, Su-Chi Liu, Hsin-Liang Su, Che-Yu Yeh, I-Jeng Yen, Meng-Chi Anuraga, Gangga Ta, Hoang Dang Khoa Chiao, Chung-Chieh Xuan, Do Thi Minh Prayugo, Fidelia Berenice Wang, Wei-Jan Wang, Chih-Yang |
author_facet | Ku, Su-Chi Liu, Hsin-Liang Su, Che-Yu Yeh, I-Jeng Yen, Meng-Chi Anuraga, Gangga Ta, Hoang Dang Khoa Chiao, Chung-Chieh Xuan, Do Thi Minh Prayugo, Fidelia Berenice Wang, Wei-Jan Wang, Chih-Yang |
author_sort | Ku, Su-Chi |
collection | PubMed |
description | Breast cancer is one of the leading deaths in all kinds of malignancies; therefore, it is important for early detection. At the primary tumor site, tumor cells could take on mesenchymal properties, termed the epithelial-to-mesenchymal transition (EMT). This process is partly regulated by members of the cadherin (CDH) family of genes, and it is an essential step in the formation of metastases. There has been a lot of study of the roles of some of the CDH family genes in cancer; however, a holistic approach examining the roles of distinct CDH family genes in the development of breast cancer remains largely unexplored. In the present study, we used a bioinformatics approach to examine expression profiles of CDH family genes using the Oncomine, Gene Expression Profiling Interactive Analysis 2 (GEPIA2), cBioPortal, MetaCore, and Tumor IMmune Estimation Resource (TIMER) platforms. We revealed that CDH1/2/4/11/12/13 messenger (m)RNA levels are overexpressed in breast cancer cells compared to normal cells and were correlated with poor prognoses in breast cancer patients’ distant metastasis-free survival. An enrichment analysis showed that high expressions of CDH1/2/4/11/12/13 were significantly correlated with cell adhesion, the extracellular matrix remodeling process, the EMT, WNT/beta-catenin, and interleukin-mediated immune responses. Collectively, CDH1/2/4/11/12/13 are thought to be potential biomarkers for breast cancer progression and metastasis. |
format | Online Article Text |
id | pubmed-9648792 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-96487922022-11-14 Comprehensive analysis of prognostic significance of cadherin (CDH) gene family in breast cancer Ku, Su-Chi Liu, Hsin-Liang Su, Che-Yu Yeh, I-Jeng Yen, Meng-Chi Anuraga, Gangga Ta, Hoang Dang Khoa Chiao, Chung-Chieh Xuan, Do Thi Minh Prayugo, Fidelia Berenice Wang, Wei-Jan Wang, Chih-Yang Aging (Albany NY) Research Paper Breast cancer is one of the leading deaths in all kinds of malignancies; therefore, it is important for early detection. At the primary tumor site, tumor cells could take on mesenchymal properties, termed the epithelial-to-mesenchymal transition (EMT). This process is partly regulated by members of the cadherin (CDH) family of genes, and it is an essential step in the formation of metastases. There has been a lot of study of the roles of some of the CDH family genes in cancer; however, a holistic approach examining the roles of distinct CDH family genes in the development of breast cancer remains largely unexplored. In the present study, we used a bioinformatics approach to examine expression profiles of CDH family genes using the Oncomine, Gene Expression Profiling Interactive Analysis 2 (GEPIA2), cBioPortal, MetaCore, and Tumor IMmune Estimation Resource (TIMER) platforms. We revealed that CDH1/2/4/11/12/13 messenger (m)RNA levels are overexpressed in breast cancer cells compared to normal cells and were correlated with poor prognoses in breast cancer patients’ distant metastasis-free survival. An enrichment analysis showed that high expressions of CDH1/2/4/11/12/13 were significantly correlated with cell adhesion, the extracellular matrix remodeling process, the EMT, WNT/beta-catenin, and interleukin-mediated immune responses. Collectively, CDH1/2/4/11/12/13 are thought to be potential biomarkers for breast cancer progression and metastasis. Impact Journals 2022-10-25 /pmc/articles/PMC9648792/ /pubmed/36315446 http://dx.doi.org/10.18632/aging.204357 Text en Copyright: © 2022 Ku et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Ku, Su-Chi Liu, Hsin-Liang Su, Che-Yu Yeh, I-Jeng Yen, Meng-Chi Anuraga, Gangga Ta, Hoang Dang Khoa Chiao, Chung-Chieh Xuan, Do Thi Minh Prayugo, Fidelia Berenice Wang, Wei-Jan Wang, Chih-Yang Comprehensive analysis of prognostic significance of cadherin (CDH) gene family in breast cancer |
title | Comprehensive analysis of prognostic significance of cadherin (CDH) gene family in breast cancer |
title_full | Comprehensive analysis of prognostic significance of cadherin (CDH) gene family in breast cancer |
title_fullStr | Comprehensive analysis of prognostic significance of cadherin (CDH) gene family in breast cancer |
title_full_unstemmed | Comprehensive analysis of prognostic significance of cadherin (CDH) gene family in breast cancer |
title_short | Comprehensive analysis of prognostic significance of cadherin (CDH) gene family in breast cancer |
title_sort | comprehensive analysis of prognostic significance of cadherin (cdh) gene family in breast cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9648792/ https://www.ncbi.nlm.nih.gov/pubmed/36315446 http://dx.doi.org/10.18632/aging.204357 |
work_keys_str_mv | AT kusuchi comprehensiveanalysisofprognosticsignificanceofcadherincdhgenefamilyinbreastcancer AT liuhsinliang comprehensiveanalysisofprognosticsignificanceofcadherincdhgenefamilyinbreastcancer AT sucheyu comprehensiveanalysisofprognosticsignificanceofcadherincdhgenefamilyinbreastcancer AT yehijeng comprehensiveanalysisofprognosticsignificanceofcadherincdhgenefamilyinbreastcancer AT yenmengchi comprehensiveanalysisofprognosticsignificanceofcadherincdhgenefamilyinbreastcancer AT anuragagangga comprehensiveanalysisofprognosticsignificanceofcadherincdhgenefamilyinbreastcancer AT tahoangdangkhoa comprehensiveanalysisofprognosticsignificanceofcadherincdhgenefamilyinbreastcancer AT chiaochungchieh comprehensiveanalysisofprognosticsignificanceofcadherincdhgenefamilyinbreastcancer AT xuandothiminh comprehensiveanalysisofprognosticsignificanceofcadherincdhgenefamilyinbreastcancer AT prayugofideliaberenice comprehensiveanalysisofprognosticsignificanceofcadherincdhgenefamilyinbreastcancer AT wangweijan comprehensiveanalysisofprognosticsignificanceofcadherincdhgenefamilyinbreastcancer AT wangchihyang comprehensiveanalysisofprognosticsignificanceofcadherincdhgenefamilyinbreastcancer |