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Predicting health crises from early warning signs in patient medical records

The COVID-19 global pandemic has caused unprecedented worldwide changes in healthcare delivery. While containment and mitigation approaches have been intensified, the progressive increase in the number of cases has overwhelmed health systems globally, highlighting the need for anticipation and predi...

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Autores principales: Gumustop, Selin, Gallo-Bernal, Sebastian, McPeake, Fionnuala, Briggs, Daniel, Gee, Michael S., Pianykh, Oleg S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9649019/
https://www.ncbi.nlm.nih.gov/pubmed/36357666
http://dx.doi.org/10.1038/s41598-022-23900-8
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author Gumustop, Selin
Gallo-Bernal, Sebastian
McPeake, Fionnuala
Briggs, Daniel
Gee, Michael S.
Pianykh, Oleg S.
author_facet Gumustop, Selin
Gallo-Bernal, Sebastian
McPeake, Fionnuala
Briggs, Daniel
Gee, Michael S.
Pianykh, Oleg S.
author_sort Gumustop, Selin
collection PubMed
description The COVID-19 global pandemic has caused unprecedented worldwide changes in healthcare delivery. While containment and mitigation approaches have been intensified, the progressive increase in the number of cases has overwhelmed health systems globally, highlighting the need for anticipation and prediction to be the basis of an efficient response system. This study demonstrates the role of population health metrics as early warning signs of future health crises. We retrospectively collected data from the emergency department of a large academic hospital in the northeastern United States from 01/01/2019 to 08/07/2021. A total of 377,694 patient records and 303 features were included for analysis. Departing from a multivariate artificial intelligence (AI) model initially developed to predict the risk of high-flow oxygen therapy or mechanical ventilation requirement during the COVID-19 pandemic, a total of 19 original variables and eight engineered features showing to be most predictive of the outcome were selected for further analysis. The temporal trends of the selected variables before and during the pandemic were characterized to determine their potential roles as early warning signs of future health crises. Temporal analysis of the individual variables included in the high-flow oxygen model showed that at a population level, the respiratory rate, temperature, low oxygen saturation, number of diagnoses during the first encounter, heart rate, BMI, age, sex, and neutrophil percentage demonstrated observable and traceable changes eight weeks before the first COVID-19 public health emergency declaration. Additionally, the engineered rule-based features built from the original variables also exhibited a pre-pandemic surge that preceded the first pandemic wave in spring 2020. Our findings suggest that the changes in routine population health metrics may serve as early warnings of future crises. This justifies the development of patient health surveillance systems, that can continuously monitor population health features, and alarm of new approaching public health crises before they become devastating.
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spelling pubmed-96490192022-11-14 Predicting health crises from early warning signs in patient medical records Gumustop, Selin Gallo-Bernal, Sebastian McPeake, Fionnuala Briggs, Daniel Gee, Michael S. Pianykh, Oleg S. Sci Rep Article The COVID-19 global pandemic has caused unprecedented worldwide changes in healthcare delivery. While containment and mitigation approaches have been intensified, the progressive increase in the number of cases has overwhelmed health systems globally, highlighting the need for anticipation and prediction to be the basis of an efficient response system. This study demonstrates the role of population health metrics as early warning signs of future health crises. We retrospectively collected data from the emergency department of a large academic hospital in the northeastern United States from 01/01/2019 to 08/07/2021. A total of 377,694 patient records and 303 features were included for analysis. Departing from a multivariate artificial intelligence (AI) model initially developed to predict the risk of high-flow oxygen therapy or mechanical ventilation requirement during the COVID-19 pandemic, a total of 19 original variables and eight engineered features showing to be most predictive of the outcome were selected for further analysis. The temporal trends of the selected variables before and during the pandemic were characterized to determine their potential roles as early warning signs of future health crises. Temporal analysis of the individual variables included in the high-flow oxygen model showed that at a population level, the respiratory rate, temperature, low oxygen saturation, number of diagnoses during the first encounter, heart rate, BMI, age, sex, and neutrophil percentage demonstrated observable and traceable changes eight weeks before the first COVID-19 public health emergency declaration. Additionally, the engineered rule-based features built from the original variables also exhibited a pre-pandemic surge that preceded the first pandemic wave in spring 2020. Our findings suggest that the changes in routine population health metrics may serve as early warnings of future crises. This justifies the development of patient health surveillance systems, that can continuously monitor population health features, and alarm of new approaching public health crises before they become devastating. Nature Publishing Group UK 2022-11-10 /pmc/articles/PMC9649019/ /pubmed/36357666 http://dx.doi.org/10.1038/s41598-022-23900-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Gumustop, Selin
Gallo-Bernal, Sebastian
McPeake, Fionnuala
Briggs, Daniel
Gee, Michael S.
Pianykh, Oleg S.
Predicting health crises from early warning signs in patient medical records
title Predicting health crises from early warning signs in patient medical records
title_full Predicting health crises from early warning signs in patient medical records
title_fullStr Predicting health crises from early warning signs in patient medical records
title_full_unstemmed Predicting health crises from early warning signs in patient medical records
title_short Predicting health crises from early warning signs in patient medical records
title_sort predicting health crises from early warning signs in patient medical records
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9649019/
https://www.ncbi.nlm.nih.gov/pubmed/36357666
http://dx.doi.org/10.1038/s41598-022-23900-8
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