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Performance analysis of seven Convolutional Neural Networks (CNNs) with transfer learning for Invasive Ductal Carcinoma (IDC) grading in breast histopathological images

Computer-aided Invasive Ductal Carcinoma (IDC) grading classification systems based on deep learning have shown that deep learning may achieve reliable accuracy in IDC grade classification using histopathology images. However, there is a dearth of comprehensive performance comparisons of Convolution...

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Autores principales: Voon, Wingates, Hum, Yan Chai, Tee, Yee Kai, Yap, Wun-She, Salim, Maheza Irna Mohamad, Tan, Tian Swee, Mokayed, Hamam, Lai, Khin Wee
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9649772/
https://www.ncbi.nlm.nih.gov/pubmed/36357456
http://dx.doi.org/10.1038/s41598-022-21848-3
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author Voon, Wingates
Hum, Yan Chai
Tee, Yee Kai
Yap, Wun-She
Salim, Maheza Irna Mohamad
Tan, Tian Swee
Mokayed, Hamam
Lai, Khin Wee
author_facet Voon, Wingates
Hum, Yan Chai
Tee, Yee Kai
Yap, Wun-She
Salim, Maheza Irna Mohamad
Tan, Tian Swee
Mokayed, Hamam
Lai, Khin Wee
author_sort Voon, Wingates
collection PubMed
description Computer-aided Invasive Ductal Carcinoma (IDC) grading classification systems based on deep learning have shown that deep learning may achieve reliable accuracy in IDC grade classification using histopathology images. However, there is a dearth of comprehensive performance comparisons of Convolutional Neural Network (CNN) designs on IDC in the literature. As such, we would like to conduct a comparison analysis of the performance of seven selected CNN models: EfficientNetB0, EfficientNetV2B0, EfficientNetV2B0-21k, ResNetV1-50, ResNetV2-50, MobileNetV1, and MobileNetV2 with transfer learning. To implement each pre-trained CNN architecture, we deployed the corresponded feature vector available from the TensorFlowHub, integrating it with dropout and dense layers to form a complete CNN model. Our findings indicated that the EfficientNetV2B0-21k (0.72B Floating-Point Operations and 7.1 M parameters) outperformed other CNN models in the IDC grading task. Nevertheless, we discovered that practically all selected CNN models perform well in the IDC grading task, with an average balanced accuracy of 0.936 ± 0.0189 on the cross-validation set and 0.9308 ± 0.0211on the test set.
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spelling pubmed-96497722022-11-15 Performance analysis of seven Convolutional Neural Networks (CNNs) with transfer learning for Invasive Ductal Carcinoma (IDC) grading in breast histopathological images Voon, Wingates Hum, Yan Chai Tee, Yee Kai Yap, Wun-She Salim, Maheza Irna Mohamad Tan, Tian Swee Mokayed, Hamam Lai, Khin Wee Sci Rep Article Computer-aided Invasive Ductal Carcinoma (IDC) grading classification systems based on deep learning have shown that deep learning may achieve reliable accuracy in IDC grade classification using histopathology images. However, there is a dearth of comprehensive performance comparisons of Convolutional Neural Network (CNN) designs on IDC in the literature. As such, we would like to conduct a comparison analysis of the performance of seven selected CNN models: EfficientNetB0, EfficientNetV2B0, EfficientNetV2B0-21k, ResNetV1-50, ResNetV2-50, MobileNetV1, and MobileNetV2 with transfer learning. To implement each pre-trained CNN architecture, we deployed the corresponded feature vector available from the TensorFlowHub, integrating it with dropout and dense layers to form a complete CNN model. Our findings indicated that the EfficientNetV2B0-21k (0.72B Floating-Point Operations and 7.1 M parameters) outperformed other CNN models in the IDC grading task. Nevertheless, we discovered that practically all selected CNN models perform well in the IDC grading task, with an average balanced accuracy of 0.936 ± 0.0189 on the cross-validation set and 0.9308 ± 0.0211on the test set. Nature Publishing Group UK 2022-11-10 /pmc/articles/PMC9649772/ /pubmed/36357456 http://dx.doi.org/10.1038/s41598-022-21848-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Voon, Wingates
Hum, Yan Chai
Tee, Yee Kai
Yap, Wun-She
Salim, Maheza Irna Mohamad
Tan, Tian Swee
Mokayed, Hamam
Lai, Khin Wee
Performance analysis of seven Convolutional Neural Networks (CNNs) with transfer learning for Invasive Ductal Carcinoma (IDC) grading in breast histopathological images
title Performance analysis of seven Convolutional Neural Networks (CNNs) with transfer learning for Invasive Ductal Carcinoma (IDC) grading in breast histopathological images
title_full Performance analysis of seven Convolutional Neural Networks (CNNs) with transfer learning for Invasive Ductal Carcinoma (IDC) grading in breast histopathological images
title_fullStr Performance analysis of seven Convolutional Neural Networks (CNNs) with transfer learning for Invasive Ductal Carcinoma (IDC) grading in breast histopathological images
title_full_unstemmed Performance analysis of seven Convolutional Neural Networks (CNNs) with transfer learning for Invasive Ductal Carcinoma (IDC) grading in breast histopathological images
title_short Performance analysis of seven Convolutional Neural Networks (CNNs) with transfer learning for Invasive Ductal Carcinoma (IDC) grading in breast histopathological images
title_sort performance analysis of seven convolutional neural networks (cnns) with transfer learning for invasive ductal carcinoma (idc) grading in breast histopathological images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9649772/
https://www.ncbi.nlm.nih.gov/pubmed/36357456
http://dx.doi.org/10.1038/s41598-022-21848-3
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