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Metabarcoding assessment of fungal diversity in brown algae and sponges of Mauritius

Marine fungi are largely associated with second most inhabitants of the marine ecosystem such as sponges and algae. They are important colonizers and play vital ecological roles, such as nutrient cycling, organic matter decomposition, and symbiosis with other organisms. High throughput sequencing me...

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Autores principales: Wong Chin, Jessica Mélanie, Puchooa, Daneshwar, Bahorun, Theeshan, Neergheen, Vidushi S., Aullybux, Aadil Ahmad, Beedessee, Girish, Nazurally, Nadeem, Alrefaei, Abdulwahed Fahad, Jeewon, Rajesh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
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Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9649896/
https://www.ncbi.nlm.nih.gov/pubmed/36386692
http://dx.doi.org/10.3389/fmicb.2022.1003790
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author Wong Chin, Jessica Mélanie
Puchooa, Daneshwar
Bahorun, Theeshan
Neergheen, Vidushi S.
Aullybux, Aadil Ahmad
Beedessee, Girish
Nazurally, Nadeem
Alrefaei, Abdulwahed Fahad
Jeewon, Rajesh
author_facet Wong Chin, Jessica Mélanie
Puchooa, Daneshwar
Bahorun, Theeshan
Neergheen, Vidushi S.
Aullybux, Aadil Ahmad
Beedessee, Girish
Nazurally, Nadeem
Alrefaei, Abdulwahed Fahad
Jeewon, Rajesh
author_sort Wong Chin, Jessica Mélanie
collection PubMed
description Marine fungi are largely associated with second most inhabitants of the marine ecosystem such as sponges and algae. They are important colonizers and play vital ecological roles, such as nutrient cycling, organic matter decomposition, and symbiosis with other organisms. High throughput sequencing methods have been used successfully to reveal unknown fungal communities associated with a number of hosts particularly in the marine environment. However, the diversity of marine fungi associated with sponges and brown algae in Mauritius remains largely unknown. Traditional methods based on culturing do not provide reliable estimate of fungal diversity as only those that are able to grow under laboratory conditions are dominant; in addition, a large proportion of fungi, cultured in vitro remain most of the time unidentifiable, given that there are no sporulating structures to be examined morphologically. To overcome these limitations, we employed Illumina sequencing to unravel fungi species present in the sponges, Iotrochota sp. and Biemna sp. and the brown algae Turbinaria conoides, Sargassum pfeifferae, and Sargassum obovatum, collected from the north of Mauritius. Diversity analyses revealed that Biemna sp. had the highest diversity from the sampled sponges with fungi from 24 orders being recovered while from brown algae; Turbinaria conoides had the highest diversity with recovery of fungal taxa of the orders Botryosphaeriales, Chaetothyriales, Eurotiales, Hypocreales, and Mucorales with the latter four orders being common in both sampled algae and sponges. Beta diversity analyses revealed clustering only in the algae, Turbinaria conoides, and Sargassum pfeifferae and not in the co-occurring sponges, indicating that sampling location did not have much influence on fungal diversity. Our findings provide the first amplicon sequencing based insights of the fungal communities associated with macro-algae and sponges in Mauritius and supplements research on the fungal community existing in the oceans around the world.
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spelling pubmed-96498962022-11-15 Metabarcoding assessment of fungal diversity in brown algae and sponges of Mauritius Wong Chin, Jessica Mélanie Puchooa, Daneshwar Bahorun, Theeshan Neergheen, Vidushi S. Aullybux, Aadil Ahmad Beedessee, Girish Nazurally, Nadeem Alrefaei, Abdulwahed Fahad Jeewon, Rajesh Front Microbiol Microbiology Marine fungi are largely associated with second most inhabitants of the marine ecosystem such as sponges and algae. They are important colonizers and play vital ecological roles, such as nutrient cycling, organic matter decomposition, and symbiosis with other organisms. High throughput sequencing methods have been used successfully to reveal unknown fungal communities associated with a number of hosts particularly in the marine environment. However, the diversity of marine fungi associated with sponges and brown algae in Mauritius remains largely unknown. Traditional methods based on culturing do not provide reliable estimate of fungal diversity as only those that are able to grow under laboratory conditions are dominant; in addition, a large proportion of fungi, cultured in vitro remain most of the time unidentifiable, given that there are no sporulating structures to be examined morphologically. To overcome these limitations, we employed Illumina sequencing to unravel fungi species present in the sponges, Iotrochota sp. and Biemna sp. and the brown algae Turbinaria conoides, Sargassum pfeifferae, and Sargassum obovatum, collected from the north of Mauritius. Diversity analyses revealed that Biemna sp. had the highest diversity from the sampled sponges with fungi from 24 orders being recovered while from brown algae; Turbinaria conoides had the highest diversity with recovery of fungal taxa of the orders Botryosphaeriales, Chaetothyriales, Eurotiales, Hypocreales, and Mucorales with the latter four orders being common in both sampled algae and sponges. Beta diversity analyses revealed clustering only in the algae, Turbinaria conoides, and Sargassum pfeifferae and not in the co-occurring sponges, indicating that sampling location did not have much influence on fungal diversity. Our findings provide the first amplicon sequencing based insights of the fungal communities associated with macro-algae and sponges in Mauritius and supplements research on the fungal community existing in the oceans around the world. Frontiers Media S.A. 2022-10-28 /pmc/articles/PMC9649896/ /pubmed/36386692 http://dx.doi.org/10.3389/fmicb.2022.1003790 Text en Copyright © 2022 Wong Chin, Puchooa, Bahorun, Neergheen, Aullybux, Beedessee, Nazurally, Alrefaei and Jeewon. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Wong Chin, Jessica Mélanie
Puchooa, Daneshwar
Bahorun, Theeshan
Neergheen, Vidushi S.
Aullybux, Aadil Ahmad
Beedessee, Girish
Nazurally, Nadeem
Alrefaei, Abdulwahed Fahad
Jeewon, Rajesh
Metabarcoding assessment of fungal diversity in brown algae and sponges of Mauritius
title Metabarcoding assessment of fungal diversity in brown algae and sponges of Mauritius
title_full Metabarcoding assessment of fungal diversity in brown algae and sponges of Mauritius
title_fullStr Metabarcoding assessment of fungal diversity in brown algae and sponges of Mauritius
title_full_unstemmed Metabarcoding assessment of fungal diversity in brown algae and sponges of Mauritius
title_short Metabarcoding assessment of fungal diversity in brown algae and sponges of Mauritius
title_sort metabarcoding assessment of fungal diversity in brown algae and sponges of mauritius
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9649896/
https://www.ncbi.nlm.nih.gov/pubmed/36386692
http://dx.doi.org/10.3389/fmicb.2022.1003790
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