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The Real-World Experiences of Persons With Multiple Sclerosis During the First COVID-19 Lockdown: Application of Natural Language Processing

BACKGROUND: The increasing availability of “real-world” data in the form of written text holds promise for deepening our understanding of societal and health-related challenges. Textual data constitute a rich source of information, allowing the capture of lived experiences through a broad range of d...

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Autores principales: Chiavi, Deborah, Haag, Christina, Chan, Andrew, Kamm, Christian Philipp, Sieber, Chloé, Stanikić, Mina, Rodgers, Stephanie, Pot, Caroline, Kesselring, Jürg, Salmen, Anke, Rapold, Irene, Calabrese, Pasquale, Manjaly, Zina-Mary, Gobbi, Claudio, Zecca, Chiara, Walther, Sebastian, Stegmayer, Katharina, Hoepner, Robert, Puhan, Milo, von Wyl, Viktor
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9651007/
https://www.ncbi.nlm.nih.gov/pubmed/36252126
http://dx.doi.org/10.2196/37945
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author Chiavi, Deborah
Haag, Christina
Chan, Andrew
Kamm, Christian Philipp
Sieber, Chloé
Stanikić, Mina
Rodgers, Stephanie
Pot, Caroline
Kesselring, Jürg
Salmen, Anke
Rapold, Irene
Calabrese, Pasquale
Manjaly, Zina-Mary
Gobbi, Claudio
Zecca, Chiara
Walther, Sebastian
Stegmayer, Katharina
Hoepner, Robert
Puhan, Milo
von Wyl, Viktor
author_facet Chiavi, Deborah
Haag, Christina
Chan, Andrew
Kamm, Christian Philipp
Sieber, Chloé
Stanikić, Mina
Rodgers, Stephanie
Pot, Caroline
Kesselring, Jürg
Salmen, Anke
Rapold, Irene
Calabrese, Pasquale
Manjaly, Zina-Mary
Gobbi, Claudio
Zecca, Chiara
Walther, Sebastian
Stegmayer, Katharina
Hoepner, Robert
Puhan, Milo
von Wyl, Viktor
author_sort Chiavi, Deborah
collection PubMed
description BACKGROUND: The increasing availability of “real-world” data in the form of written text holds promise for deepening our understanding of societal and health-related challenges. Textual data constitute a rich source of information, allowing the capture of lived experiences through a broad range of different sources of information (eg, content and emotional tone). Interviews are the “gold standard” for gaining qualitative insights into individual experiences and perspectives. However, conducting interviews on a large scale is not always feasible, and standardized quantitative assessment suitable for large-scale application may miss important information. Surveys that include open-text assessments can combine the advantages of both methods and are well suited for the application of natural language processing (NLP) methods. While innovations in NLP have made large-scale text analysis more accessible, the analysis of real-world textual data is still complex and requires several consecutive steps. OBJECTIVE: We developed and subsequently examined the utility and scientific value of an NLP pipeline for extracting real-world experiences from textual data to provide guidance for applied researchers. METHODS: We applied the NLP pipeline to large-scale textual data collected by the Swiss Multiple Sclerosis (MS) registry. Such textual data constitute an ideal use case for the study of real-world text data. Specifically, we examined 639 text reports on the experienced impact of the first COVID-19 lockdown from the perspectives of persons with MS. The pipeline has been implemented in Python and complemented by analyses of the “Linguistic Inquiry and Word Count” software. It consists of the following 5 interconnected analysis steps: (1) text preprocessing; (2) sentiment analysis; (3) descriptive text analysis; (4) unsupervised learning–topic modeling; and (5) results interpretation and validation. RESULTS: A topic modeling analysis identified the following 4 distinct groups based on the topics participants were mainly concerned with: “contacts/communication;” “social environment;” “work;” and “errands/daily routines.” Notably, the sentiment analysis revealed that the “contacts/communication” group was characterized by a pronounced negative emotional tone underlying the text reports. This observed heterogeneity in emotional tonality underlying the reported experiences of the first COVID-19–related lockdown is likely to reflect differences in emotional burden, individual circumstances, and ways of coping with the pandemic, which is in line with previous research on this matter. CONCLUSIONS: This study illustrates the timely and efficient applicability of an NLP pipeline and thereby serves as a precedent for applied researchers. Our study thereby contributes to both the dissemination of NLP techniques in applied health sciences and the identification of previously unknown experiences and burdens of persons with MS during the pandemic, which may be relevant for future treatment.
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spelling pubmed-96510072022-11-15 The Real-World Experiences of Persons With Multiple Sclerosis During the First COVID-19 Lockdown: Application of Natural Language Processing Chiavi, Deborah Haag, Christina Chan, Andrew Kamm, Christian Philipp Sieber, Chloé Stanikić, Mina Rodgers, Stephanie Pot, Caroline Kesselring, Jürg Salmen, Anke Rapold, Irene Calabrese, Pasquale Manjaly, Zina-Mary Gobbi, Claudio Zecca, Chiara Walther, Sebastian Stegmayer, Katharina Hoepner, Robert Puhan, Milo von Wyl, Viktor JMIR Med Inform Original Paper BACKGROUND: The increasing availability of “real-world” data in the form of written text holds promise for deepening our understanding of societal and health-related challenges. Textual data constitute a rich source of information, allowing the capture of lived experiences through a broad range of different sources of information (eg, content and emotional tone). Interviews are the “gold standard” for gaining qualitative insights into individual experiences and perspectives. However, conducting interviews on a large scale is not always feasible, and standardized quantitative assessment suitable for large-scale application may miss important information. Surveys that include open-text assessments can combine the advantages of both methods and are well suited for the application of natural language processing (NLP) methods. While innovations in NLP have made large-scale text analysis more accessible, the analysis of real-world textual data is still complex and requires several consecutive steps. OBJECTIVE: We developed and subsequently examined the utility and scientific value of an NLP pipeline for extracting real-world experiences from textual data to provide guidance for applied researchers. METHODS: We applied the NLP pipeline to large-scale textual data collected by the Swiss Multiple Sclerosis (MS) registry. Such textual data constitute an ideal use case for the study of real-world text data. Specifically, we examined 639 text reports on the experienced impact of the first COVID-19 lockdown from the perspectives of persons with MS. The pipeline has been implemented in Python and complemented by analyses of the “Linguistic Inquiry and Word Count” software. It consists of the following 5 interconnected analysis steps: (1) text preprocessing; (2) sentiment analysis; (3) descriptive text analysis; (4) unsupervised learning–topic modeling; and (5) results interpretation and validation. RESULTS: A topic modeling analysis identified the following 4 distinct groups based on the topics participants were mainly concerned with: “contacts/communication;” “social environment;” “work;” and “errands/daily routines.” Notably, the sentiment analysis revealed that the “contacts/communication” group was characterized by a pronounced negative emotional tone underlying the text reports. This observed heterogeneity in emotional tonality underlying the reported experiences of the first COVID-19–related lockdown is likely to reflect differences in emotional burden, individual circumstances, and ways of coping with the pandemic, which is in line with previous research on this matter. CONCLUSIONS: This study illustrates the timely and efficient applicability of an NLP pipeline and thereby serves as a precedent for applied researchers. Our study thereby contributes to both the dissemination of NLP techniques in applied health sciences and the identification of previously unknown experiences and burdens of persons with MS during the pandemic, which may be relevant for future treatment. JMIR Publications 2022-11-10 /pmc/articles/PMC9651007/ /pubmed/36252126 http://dx.doi.org/10.2196/37945 Text en ©Deborah Chiavi, Christina Haag, Andrew Chan, Christian Philipp Kamm, Chloé Sieber, Mina Stanikić, Stephanie Rodgers, Caroline Pot, Jürg Kesselring, Anke Salmen, Irene Rapold, Pasquale Calabrese, Zina-Mary Manjaly, Claudio Gobbi, Chiara Zecca, Sebastian Walther, Katharina Stegmayer, Robert Hoepner, Milo Puhan, Viktor von Wyl. Originally published in JMIR Medical Informatics (https://medinform.jmir.org), 10.11.2022. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on https://medinform.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Original Paper
Chiavi, Deborah
Haag, Christina
Chan, Andrew
Kamm, Christian Philipp
Sieber, Chloé
Stanikić, Mina
Rodgers, Stephanie
Pot, Caroline
Kesselring, Jürg
Salmen, Anke
Rapold, Irene
Calabrese, Pasquale
Manjaly, Zina-Mary
Gobbi, Claudio
Zecca, Chiara
Walther, Sebastian
Stegmayer, Katharina
Hoepner, Robert
Puhan, Milo
von Wyl, Viktor
The Real-World Experiences of Persons With Multiple Sclerosis During the First COVID-19 Lockdown: Application of Natural Language Processing
title The Real-World Experiences of Persons With Multiple Sclerosis During the First COVID-19 Lockdown: Application of Natural Language Processing
title_full The Real-World Experiences of Persons With Multiple Sclerosis During the First COVID-19 Lockdown: Application of Natural Language Processing
title_fullStr The Real-World Experiences of Persons With Multiple Sclerosis During the First COVID-19 Lockdown: Application of Natural Language Processing
title_full_unstemmed The Real-World Experiences of Persons With Multiple Sclerosis During the First COVID-19 Lockdown: Application of Natural Language Processing
title_short The Real-World Experiences of Persons With Multiple Sclerosis During the First COVID-19 Lockdown: Application of Natural Language Processing
title_sort real-world experiences of persons with multiple sclerosis during the first covid-19 lockdown: application of natural language processing
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9651007/
https://www.ncbi.nlm.nih.gov/pubmed/36252126
http://dx.doi.org/10.2196/37945
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