Cargando…
Hedysarum multijugum Maxim treats ulcerative colitis through the PI3K-AKT and TNF signaling pathway according to network pharmacology and molecular docking
BACKGROUND: Ulcerative colitis (UC) is a chronic inflammatory bowel disease (IBD) that prevails mainly in western countries. Due to the unknown etiology of UC, the purpose of treatments has predominantly comprised symptomatic and pain relief. With extensive research focusing on the pathogenesis of U...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9652569/ https://www.ncbi.nlm.nih.gov/pubmed/36388782 http://dx.doi.org/10.21037/atm-22-4815 |
_version_ | 1784828499648839680 |
---|---|
author | Zhang, Zihao Chong, Wei Xie, Xiaozhou Liu, Yuan Shang, Liang Li, Leping |
author_facet | Zhang, Zihao Chong, Wei Xie, Xiaozhou Liu, Yuan Shang, Liang Li, Leping |
author_sort | Zhang, Zihao |
collection | PubMed |
description | BACKGROUND: Ulcerative colitis (UC) is a chronic inflammatory bowel disease (IBD) that prevails mainly in western countries. Due to the unknown etiology of UC, the purpose of treatments has predominantly comprised symptomatic and pain relief. With extensive research focusing on the pathogenesis of UC, various novel treatments have emerged, although their efficiency has remained unsatisfactory. Hedysarum multijugum Maxim (HMM), a crucial constituent of traditional Chinese medicine, has a broad application in many diseases and has been found beneficial for UC patients. METHODS: In this study, network pharmacology and molecular docking analyses were applied to explore the potential mechanism of HMM treating UC. Active ingredients of HMM and target genes were acquired from the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP). UC-related genes were obtained from three disease databases. Common genes were selected from these two gene sets, and a compound-genes network was drawn by Cytoscape. Kyoto Encyclopedia of Genes and Genomes (KEGG), Gene Ontology (GO) enrichment, and protein-protein interaction (PPI) analyses were performed to identify the essential pathways and proteins in UC. RESULTS: A total of 121 genes were found related to UC and targeted by HMM. The GO and KEGG analyses showed that these genes were associated with inflammation and immune signaling pathways and inflammation-related biological processes (BP) such as the tumor necrosis factor (TNF) and PI3K-AKT signaling pathways. Four active ingredients (quercetin, kaempferol, formononetin, and isorhamnetin) and five genes (RELA, MAPK14, MAPK1, JUN, AKT1) were reserved after screening. Molecular docking further showed that the receptor had a high binding affinity with HMM active ingredients. CONCLUSIONS: This study revealed that HMM treats UC through four active ingredients (quercetin, kaempferol, formononetin, and isorhamnetin) targeting five hub genes (RELA, MAPK14, MAPK1, JUN, AKT1) by regulating the PI3K-AKT1 and TNF signaling pathways. |
format | Online Article Text |
id | pubmed-9652569 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-96525692022-11-15 Hedysarum multijugum Maxim treats ulcerative colitis through the PI3K-AKT and TNF signaling pathway according to network pharmacology and molecular docking Zhang, Zihao Chong, Wei Xie, Xiaozhou Liu, Yuan Shang, Liang Li, Leping Ann Transl Med Original Article BACKGROUND: Ulcerative colitis (UC) is a chronic inflammatory bowel disease (IBD) that prevails mainly in western countries. Due to the unknown etiology of UC, the purpose of treatments has predominantly comprised symptomatic and pain relief. With extensive research focusing on the pathogenesis of UC, various novel treatments have emerged, although their efficiency has remained unsatisfactory. Hedysarum multijugum Maxim (HMM), a crucial constituent of traditional Chinese medicine, has a broad application in many diseases and has been found beneficial for UC patients. METHODS: In this study, network pharmacology and molecular docking analyses were applied to explore the potential mechanism of HMM treating UC. Active ingredients of HMM and target genes were acquired from the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP). UC-related genes were obtained from three disease databases. Common genes were selected from these two gene sets, and a compound-genes network was drawn by Cytoscape. Kyoto Encyclopedia of Genes and Genomes (KEGG), Gene Ontology (GO) enrichment, and protein-protein interaction (PPI) analyses were performed to identify the essential pathways and proteins in UC. RESULTS: A total of 121 genes were found related to UC and targeted by HMM. The GO and KEGG analyses showed that these genes were associated with inflammation and immune signaling pathways and inflammation-related biological processes (BP) such as the tumor necrosis factor (TNF) and PI3K-AKT signaling pathways. Four active ingredients (quercetin, kaempferol, formononetin, and isorhamnetin) and five genes (RELA, MAPK14, MAPK1, JUN, AKT1) were reserved after screening. Molecular docking further showed that the receptor had a high binding affinity with HMM active ingredients. CONCLUSIONS: This study revealed that HMM treats UC through four active ingredients (quercetin, kaempferol, formononetin, and isorhamnetin) targeting five hub genes (RELA, MAPK14, MAPK1, JUN, AKT1) by regulating the PI3K-AKT1 and TNF signaling pathways. AME Publishing Company 2022-10 /pmc/articles/PMC9652569/ /pubmed/36388782 http://dx.doi.org/10.21037/atm-22-4815 Text en 2022 Annals of Translational Medicine. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Original Article Zhang, Zihao Chong, Wei Xie, Xiaozhou Liu, Yuan Shang, Liang Li, Leping Hedysarum multijugum Maxim treats ulcerative colitis through the PI3K-AKT and TNF signaling pathway according to network pharmacology and molecular docking |
title | Hedysarum multijugum
Maxim treats ulcerative colitis through the PI3K-AKT and TNF signaling pathway according to network pharmacology and molecular docking |
title_full | Hedysarum multijugum
Maxim treats ulcerative colitis through the PI3K-AKT and TNF signaling pathway according to network pharmacology and molecular docking |
title_fullStr | Hedysarum multijugum
Maxim treats ulcerative colitis through the PI3K-AKT and TNF signaling pathway according to network pharmacology and molecular docking |
title_full_unstemmed | Hedysarum multijugum
Maxim treats ulcerative colitis through the PI3K-AKT and TNF signaling pathway according to network pharmacology and molecular docking |
title_short | Hedysarum multijugum
Maxim treats ulcerative colitis through the PI3K-AKT and TNF signaling pathway according to network pharmacology and molecular docking |
title_sort | hedysarum multijugum
maxim treats ulcerative colitis through the pi3k-akt and tnf signaling pathway according to network pharmacology and molecular docking |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9652569/ https://www.ncbi.nlm.nih.gov/pubmed/36388782 http://dx.doi.org/10.21037/atm-22-4815 |
work_keys_str_mv | AT zhangzihao hedysarummultijugummaximtreatsulcerativecolitisthroughthepi3kaktandtnfsignalingpathwayaccordingtonetworkpharmacologyandmoleculardocking AT chongwei hedysarummultijugummaximtreatsulcerativecolitisthroughthepi3kaktandtnfsignalingpathwayaccordingtonetworkpharmacologyandmoleculardocking AT xiexiaozhou hedysarummultijugummaximtreatsulcerativecolitisthroughthepi3kaktandtnfsignalingpathwayaccordingtonetworkpharmacologyandmoleculardocking AT liuyuan hedysarummultijugummaximtreatsulcerativecolitisthroughthepi3kaktandtnfsignalingpathwayaccordingtonetworkpharmacologyandmoleculardocking AT shangliang hedysarummultijugummaximtreatsulcerativecolitisthroughthepi3kaktandtnfsignalingpathwayaccordingtonetworkpharmacologyandmoleculardocking AT lileping hedysarummultijugummaximtreatsulcerativecolitisthroughthepi3kaktandtnfsignalingpathwayaccordingtonetworkpharmacologyandmoleculardocking |