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Retained introns in long RNA-seq reads are not reliably detected in sample-matched short reads
BACKGROUND: There is growing interest in retained introns in a variety of disease contexts including cancer and aging. Many software tools have been developed to detect retained introns from short RNA-seq reads, but reliable detection is complicated by overlapping genes and transcripts as well as th...
Autores principales: | David, Julianne K., Maden, Sean K., Wood, Mary A., Thompson, Reid F., Nellore, Abhinav |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9652823/ https://www.ncbi.nlm.nih.gov/pubmed/36369064 http://dx.doi.org/10.1186/s13059-022-02789-6 |
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