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Automatic segmentation of the gross target volume in radiotherapy for lung cancer using transresSEUnet 2.5D Network

OBJECTIVE: This paper intends to propose a method of using TransResSEUnet2.5D network for accurate automatic segmentation of the Gross Target Volume (GTV) in Radiotherapy for lung cancer. METHODS: A total of 11,370 computed tomograms (CT), deriving from 137 cases, of lung cancer patients under radio...

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Autores principales: Xie, Hui, Chen, Zijie, Deng, Jincheng, Zhang, Jianfang, Duan, Hanping, Li, Qing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9652981/
https://www.ncbi.nlm.nih.gov/pubmed/36371220
http://dx.doi.org/10.1186/s12967-022-03732-w
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author Xie, Hui
Chen, Zijie
Deng, Jincheng
Zhang, Jianfang
Duan, Hanping
Li, Qing
author_facet Xie, Hui
Chen, Zijie
Deng, Jincheng
Zhang, Jianfang
Duan, Hanping
Li, Qing
author_sort Xie, Hui
collection PubMed
description OBJECTIVE: This paper intends to propose a method of using TransResSEUnet2.5D network for accurate automatic segmentation of the Gross Target Volume (GTV) in Radiotherapy for lung cancer. METHODS: A total of 11,370 computed tomograms (CT), deriving from 137 cases, of lung cancer patients under radiotherapy developed by radiotherapists were used as the training set; 1642 CT images in 20 cases were used as the validation set, and 1685 CT images in 20 cases were used as the test set. The proposed network was tuned and trained to obtain the best segmentation model and its performance was measured by the Dice Similarity Coefficient (DSC) and with 95% Hausdorff distance (HD95). Lastly, as to demonstrate the accuracy of the automatic segmentation of the network proposed in this study, all possible mirrors of the input images were put into Unet2D, Unet2.5D, Unet3D, ResSEUnet3D, ResSEUnet2.5D, and TransResUnet2.5D, and their respective segmentation performances were compared and assessed. RESULTS: The segmentation results of the test set showed that TransResSEUnet2.5D performed the best in the DSC (84.08 ± 0.04) %, HD95 (8.11 ± 3.43) mm and time (6.50 ± 1.31) s metrics compared to the other three networks. CONCLUSIONS: The TransResSEUnet 2.5D proposed in this study can automatically segment the GTV of radiotherapy for lung cancer patients with more accuracy.
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spelling pubmed-96529812022-11-15 Automatic segmentation of the gross target volume in radiotherapy for lung cancer using transresSEUnet 2.5D Network Xie, Hui Chen, Zijie Deng, Jincheng Zhang, Jianfang Duan, Hanping Li, Qing J Transl Med Research OBJECTIVE: This paper intends to propose a method of using TransResSEUnet2.5D network for accurate automatic segmentation of the Gross Target Volume (GTV) in Radiotherapy for lung cancer. METHODS: A total of 11,370 computed tomograms (CT), deriving from 137 cases, of lung cancer patients under radiotherapy developed by radiotherapists were used as the training set; 1642 CT images in 20 cases were used as the validation set, and 1685 CT images in 20 cases were used as the test set. The proposed network was tuned and trained to obtain the best segmentation model and its performance was measured by the Dice Similarity Coefficient (DSC) and with 95% Hausdorff distance (HD95). Lastly, as to demonstrate the accuracy of the automatic segmentation of the network proposed in this study, all possible mirrors of the input images were put into Unet2D, Unet2.5D, Unet3D, ResSEUnet3D, ResSEUnet2.5D, and TransResUnet2.5D, and their respective segmentation performances were compared and assessed. RESULTS: The segmentation results of the test set showed that TransResSEUnet2.5D performed the best in the DSC (84.08 ± 0.04) %, HD95 (8.11 ± 3.43) mm and time (6.50 ± 1.31) s metrics compared to the other three networks. CONCLUSIONS: The TransResSEUnet 2.5D proposed in this study can automatically segment the GTV of radiotherapy for lung cancer patients with more accuracy. BioMed Central 2022-11-12 /pmc/articles/PMC9652981/ /pubmed/36371220 http://dx.doi.org/10.1186/s12967-022-03732-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Xie, Hui
Chen, Zijie
Deng, Jincheng
Zhang, Jianfang
Duan, Hanping
Li, Qing
Automatic segmentation of the gross target volume in radiotherapy for lung cancer using transresSEUnet 2.5D Network
title Automatic segmentation of the gross target volume in radiotherapy for lung cancer using transresSEUnet 2.5D Network
title_full Automatic segmentation of the gross target volume in radiotherapy for lung cancer using transresSEUnet 2.5D Network
title_fullStr Automatic segmentation of the gross target volume in radiotherapy for lung cancer using transresSEUnet 2.5D Network
title_full_unstemmed Automatic segmentation of the gross target volume in radiotherapy for lung cancer using transresSEUnet 2.5D Network
title_short Automatic segmentation of the gross target volume in radiotherapy for lung cancer using transresSEUnet 2.5D Network
title_sort automatic segmentation of the gross target volume in radiotherapy for lung cancer using transresseunet 2.5d network
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9652981/
https://www.ncbi.nlm.nih.gov/pubmed/36371220
http://dx.doi.org/10.1186/s12967-022-03732-w
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