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Meta-analysis of the functional neuroimaging literature with probabilistic logic programming

Inferring reliable brain-behavior associations requires synthesizing evidence from thousands of functional neuroimaging studies through meta-analysis. However, existing meta-analysis tools are limited to investigating simple neuroscience concepts and expressing a restricted range of questions. Here,...

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Autores principales: Abdallah, Majd, Iovene, Valentin, Zanitti, Gaston, Wassermann, Demian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9653422/
https://www.ncbi.nlm.nih.gov/pubmed/36371447
http://dx.doi.org/10.1038/s41598-022-21801-4
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author Abdallah, Majd
Iovene, Valentin
Zanitti, Gaston
Wassermann, Demian
author_facet Abdallah, Majd
Iovene, Valentin
Zanitti, Gaston
Wassermann, Demian
author_sort Abdallah, Majd
collection PubMed
description Inferring reliable brain-behavior associations requires synthesizing evidence from thousands of functional neuroimaging studies through meta-analysis. However, existing meta-analysis tools are limited to investigating simple neuroscience concepts and expressing a restricted range of questions. Here, we expand the scope of neuroimaging meta-analysis by designing NeuroLang: a domain-specific language to express and test hypotheses using probabilistic first-order logic programming. By leveraging formalisms found at the crossroads of artificial intelligence and knowledge representation, NeuroLang provides the expressivity to address a larger repertoire of hypotheses in a meta-analysis, while seamlessly modeling the uncertainty inherent to neuroimaging data. We demonstrate the language’s capabilities in conducting comprehensive neuroimaging meta-analysis through use-case examples that address questions of structure-function associations. Specifically, we infer the specific functional roles of three canonical brain networks, support the role of the visual word-form area in visuospatial attention, and investigate the heterogeneous organization of the frontoparietal control network.
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spelling pubmed-96534222022-11-15 Meta-analysis of the functional neuroimaging literature with probabilistic logic programming Abdallah, Majd Iovene, Valentin Zanitti, Gaston Wassermann, Demian Sci Rep Article Inferring reliable brain-behavior associations requires synthesizing evidence from thousands of functional neuroimaging studies through meta-analysis. However, existing meta-analysis tools are limited to investigating simple neuroscience concepts and expressing a restricted range of questions. Here, we expand the scope of neuroimaging meta-analysis by designing NeuroLang: a domain-specific language to express and test hypotheses using probabilistic first-order logic programming. By leveraging formalisms found at the crossroads of artificial intelligence and knowledge representation, NeuroLang provides the expressivity to address a larger repertoire of hypotheses in a meta-analysis, while seamlessly modeling the uncertainty inherent to neuroimaging data. We demonstrate the language’s capabilities in conducting comprehensive neuroimaging meta-analysis through use-case examples that address questions of structure-function associations. Specifically, we infer the specific functional roles of three canonical brain networks, support the role of the visual word-form area in visuospatial attention, and investigate the heterogeneous organization of the frontoparietal control network. Nature Publishing Group UK 2022-11-12 /pmc/articles/PMC9653422/ /pubmed/36371447 http://dx.doi.org/10.1038/s41598-022-21801-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Abdallah, Majd
Iovene, Valentin
Zanitti, Gaston
Wassermann, Demian
Meta-analysis of the functional neuroimaging literature with probabilistic logic programming
title Meta-analysis of the functional neuroimaging literature with probabilistic logic programming
title_full Meta-analysis of the functional neuroimaging literature with probabilistic logic programming
title_fullStr Meta-analysis of the functional neuroimaging literature with probabilistic logic programming
title_full_unstemmed Meta-analysis of the functional neuroimaging literature with probabilistic logic programming
title_short Meta-analysis of the functional neuroimaging literature with probabilistic logic programming
title_sort meta-analysis of the functional neuroimaging literature with probabilistic logic programming
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9653422/
https://www.ncbi.nlm.nih.gov/pubmed/36371447
http://dx.doi.org/10.1038/s41598-022-21801-4
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