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Design of a multi-epitope protein as a subunit vaccine against lumpy skin disease using an immunoinformatics approach
Lumpy skin disease (LSD) is a transboundary viral disease of cattle that causes substantial economic loss globally. There is no specific treatment and subunit vaccine for this disease to date. Reports of the global spread of this disease are worrisome. We designed a multi-epitope protein using an im...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9653426/ https://www.ncbi.nlm.nih.gov/pubmed/36371522 http://dx.doi.org/10.1038/s41598-022-23272-z |
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author | Kar, Prajna Parimita Araveti, Prasanna Babu Kuriakose, Akshay Srivastava, Anand |
author_facet | Kar, Prajna Parimita Araveti, Prasanna Babu Kuriakose, Akshay Srivastava, Anand |
author_sort | Kar, Prajna Parimita |
collection | PubMed |
description | Lumpy skin disease (LSD) is a transboundary viral disease of cattle that causes substantial economic loss globally. There is no specific treatment and subunit vaccine for this disease to date. Reports of the global spread of this disease are worrisome. We designed a multi-epitope protein using an immunoinformatics approach in this study. We analyzed the proteome of LSDV and found 32 structural/surface proteins. Four of these 32 proteins were predicted as antigenic and non-homologous to bovine and highly conserved in 26 LSDV isolates. The predicted B-cell epitopes and CTL epitopes were stitched together with the help of an AAY linker leading to the formation of a multi-epitope protein. The in silico study revealed that the modeled subunit vaccine candidate and TLR4 receptor interact with high affinity. This interaction was also found to be stable using a molecular dynamics simulation study. Our study demonstrates a leap towards developing a subunit vaccine against LSD. |
format | Online Article Text |
id | pubmed-9653426 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-96534262022-11-14 Design of a multi-epitope protein as a subunit vaccine against lumpy skin disease using an immunoinformatics approach Kar, Prajna Parimita Araveti, Prasanna Babu Kuriakose, Akshay Srivastava, Anand Sci Rep Article Lumpy skin disease (LSD) is a transboundary viral disease of cattle that causes substantial economic loss globally. There is no specific treatment and subunit vaccine for this disease to date. Reports of the global spread of this disease are worrisome. We designed a multi-epitope protein using an immunoinformatics approach in this study. We analyzed the proteome of LSDV and found 32 structural/surface proteins. Four of these 32 proteins were predicted as antigenic and non-homologous to bovine and highly conserved in 26 LSDV isolates. The predicted B-cell epitopes and CTL epitopes were stitched together with the help of an AAY linker leading to the formation of a multi-epitope protein. The in silico study revealed that the modeled subunit vaccine candidate and TLR4 receptor interact with high affinity. This interaction was also found to be stable using a molecular dynamics simulation study. Our study demonstrates a leap towards developing a subunit vaccine against LSD. Nature Publishing Group UK 2022-11-12 /pmc/articles/PMC9653426/ /pubmed/36371522 http://dx.doi.org/10.1038/s41598-022-23272-z Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Kar, Prajna Parimita Araveti, Prasanna Babu Kuriakose, Akshay Srivastava, Anand Design of a multi-epitope protein as a subunit vaccine against lumpy skin disease using an immunoinformatics approach |
title | Design of a multi-epitope protein as a subunit vaccine against lumpy skin disease using an immunoinformatics approach |
title_full | Design of a multi-epitope protein as a subunit vaccine against lumpy skin disease using an immunoinformatics approach |
title_fullStr | Design of a multi-epitope protein as a subunit vaccine against lumpy skin disease using an immunoinformatics approach |
title_full_unstemmed | Design of a multi-epitope protein as a subunit vaccine against lumpy skin disease using an immunoinformatics approach |
title_short | Design of a multi-epitope protein as a subunit vaccine against lumpy skin disease using an immunoinformatics approach |
title_sort | design of a multi-epitope protein as a subunit vaccine against lumpy skin disease using an immunoinformatics approach |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9653426/ https://www.ncbi.nlm.nih.gov/pubmed/36371522 http://dx.doi.org/10.1038/s41598-022-23272-z |
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