Cargando…

Nutritional and metabolic process of the dung beetle Phelotrupes auratus depends on the plant ingredients that the herbivores eat

BACKGROUND: The dung beetle Phelotrupes auratus is a holometabolous insect belonging to the order Coleoptera, and it is widely distributed in Japan. The P. auratus habitat depends on herbivores. P. auratus eats the dung of the herbivores and carries it underground for its young. In this process, her...

Descripción completa

Detalles Bibliográficos
Autores principales: Sakamoto, Takuma, Sinzeki, Shun, Kakinuma, Shunsuke, Ishihara, Eri, Tabunoki, Hiroko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9655807/
https://www.ncbi.nlm.nih.gov/pubmed/36371160
http://dx.doi.org/10.1186/s12864-022-08982-y
_version_ 1784829277180526592
author Sakamoto, Takuma
Sinzeki, Shun
Kakinuma, Shunsuke
Ishihara, Eri
Tabunoki, Hiroko
author_facet Sakamoto, Takuma
Sinzeki, Shun
Kakinuma, Shunsuke
Ishihara, Eri
Tabunoki, Hiroko
author_sort Sakamoto, Takuma
collection PubMed
description BACKGROUND: The dung beetle Phelotrupes auratus is a holometabolous insect belonging to the order Coleoptera, and it is widely distributed in Japan. The P. auratus habitat depends on herbivores. P. auratus eats the dung of the herbivores and carries it underground for its young. In this process, herbivore droppings disappear from the ground, not only keeping the ground hygienic but also maintaining good soil conditions for plant growth. In this way, a rich ecosystem is maintained. In recent years, the population of P. auratus has decreased, and the main cause has been the decrease in grazing land. It seems that Japanese dung beetles are mainly dependent on herbivores for nutrient sources. However, the physiological relationship between herbivores and P. auratus has not been well investigated. Here, we investigated the nutritional metabolism system of P. auratus by performing whole gene expression analysis of individuals collected from two areas where the ecosystem is occupied by different herbivores. RESULTS: We obtained 54,635 transcripts from P. auratus from Nara Park and Cape Toi and identified 2,592 differentially expressed genes in the fat bodies of the Nara Park and Cape Toi groups. We annotated P. auratus transcripts using Homo sapiens and Drosophila melanogaster genes as references; 50.5% of P. auratus transcripts were assigned to H. sapiens genes, and 54.0% of P. auratus transcripts were assigned to D. melanogaster genes. To perform gene set enrichment analysis, we chose H. sapiens genes for P. auratus transcript annotation. Principal component analysis and gene set enrichment analysis revealed that the nutritional metabolism of P. auratus from Cape Toi might differ from that of P. auratus from Nara Park. CONCLUSION: We analyzed the nutritional metabolism system of P. auratus from Cape Toi and Nara Park and found that the characteristics of the nutritional metabolism process might depend on the plants consumed by the herbivores. Our findings will contribute to elucidating the relationships among habitat plants, herbivores, and dung decomposers and may aid in the maintenance of sustainable land health cycles. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12864-022-08982-y.
format Online
Article
Text
id pubmed-9655807
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-96558072022-11-15 Nutritional and metabolic process of the dung beetle Phelotrupes auratus depends on the plant ingredients that the herbivores eat Sakamoto, Takuma Sinzeki, Shun Kakinuma, Shunsuke Ishihara, Eri Tabunoki, Hiroko BMC Genomics Research BACKGROUND: The dung beetle Phelotrupes auratus is a holometabolous insect belonging to the order Coleoptera, and it is widely distributed in Japan. The P. auratus habitat depends on herbivores. P. auratus eats the dung of the herbivores and carries it underground for its young. In this process, herbivore droppings disappear from the ground, not only keeping the ground hygienic but also maintaining good soil conditions for plant growth. In this way, a rich ecosystem is maintained. In recent years, the population of P. auratus has decreased, and the main cause has been the decrease in grazing land. It seems that Japanese dung beetles are mainly dependent on herbivores for nutrient sources. However, the physiological relationship between herbivores and P. auratus has not been well investigated. Here, we investigated the nutritional metabolism system of P. auratus by performing whole gene expression analysis of individuals collected from two areas where the ecosystem is occupied by different herbivores. RESULTS: We obtained 54,635 transcripts from P. auratus from Nara Park and Cape Toi and identified 2,592 differentially expressed genes in the fat bodies of the Nara Park and Cape Toi groups. We annotated P. auratus transcripts using Homo sapiens and Drosophila melanogaster genes as references; 50.5% of P. auratus transcripts were assigned to H. sapiens genes, and 54.0% of P. auratus transcripts were assigned to D. melanogaster genes. To perform gene set enrichment analysis, we chose H. sapiens genes for P. auratus transcript annotation. Principal component analysis and gene set enrichment analysis revealed that the nutritional metabolism of P. auratus from Cape Toi might differ from that of P. auratus from Nara Park. CONCLUSION: We analyzed the nutritional metabolism system of P. auratus from Cape Toi and Nara Park and found that the characteristics of the nutritional metabolism process might depend on the plants consumed by the herbivores. Our findings will contribute to elucidating the relationships among habitat plants, herbivores, and dung decomposers and may aid in the maintenance of sustainable land health cycles. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12864-022-08982-y. BioMed Central 2022-11-12 /pmc/articles/PMC9655807/ /pubmed/36371160 http://dx.doi.org/10.1186/s12864-022-08982-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Sakamoto, Takuma
Sinzeki, Shun
Kakinuma, Shunsuke
Ishihara, Eri
Tabunoki, Hiroko
Nutritional and metabolic process of the dung beetle Phelotrupes auratus depends on the plant ingredients that the herbivores eat
title Nutritional and metabolic process of the dung beetle Phelotrupes auratus depends on the plant ingredients that the herbivores eat
title_full Nutritional and metabolic process of the dung beetle Phelotrupes auratus depends on the plant ingredients that the herbivores eat
title_fullStr Nutritional and metabolic process of the dung beetle Phelotrupes auratus depends on the plant ingredients that the herbivores eat
title_full_unstemmed Nutritional and metabolic process of the dung beetle Phelotrupes auratus depends on the plant ingredients that the herbivores eat
title_short Nutritional and metabolic process of the dung beetle Phelotrupes auratus depends on the plant ingredients that the herbivores eat
title_sort nutritional and metabolic process of the dung beetle phelotrupes auratus depends on the plant ingredients that the herbivores eat
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9655807/
https://www.ncbi.nlm.nih.gov/pubmed/36371160
http://dx.doi.org/10.1186/s12864-022-08982-y
work_keys_str_mv AT sakamototakuma nutritionalandmetabolicprocessofthedungbeetlephelotrupesauratusdependsontheplantingredientsthattheherbivoreseat
AT sinzekishun nutritionalandmetabolicprocessofthedungbeetlephelotrupesauratusdependsontheplantingredientsthattheherbivoreseat
AT kakinumashunsuke nutritionalandmetabolicprocessofthedungbeetlephelotrupesauratusdependsontheplantingredientsthattheherbivoreseat
AT ishiharaeri nutritionalandmetabolicprocessofthedungbeetlephelotrupesauratusdependsontheplantingredientsthattheherbivoreseat
AT tabunokihiroko nutritionalandmetabolicprocessofthedungbeetlephelotrupesauratusdependsontheplantingredientsthattheherbivoreseat