Cargando…

Regulation of Tyrosinase Gene Expression by Retinoic Acid Pathway in the Pacific Oyster Crassostrea gigas

Retinoic acid (RA) plays important roles in various biological processes in animals. RA signaling is mediated by two types of nuclear receptors, namely retinoic acid receptor (RAR) and retinoid x receptor (RXR), which regulate gene expression by binding to retinoic acid response elements (RAREs) in...

Descripción completa

Detalles Bibliográficos
Autores principales: Jin, Qianqian, Huo, Chuncao, Yang, Wenhao, Jin, Kaidi, Cai, Shuai, Zheng, Yanxin, Huang, Baoyu, Wei, Lei, Zhang, Meiwei, Han, Yijing, Zhang, Xuekai, Liu, Yaqiong, Wang, Xiaotong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9656583/
https://www.ncbi.nlm.nih.gov/pubmed/36361629
http://dx.doi.org/10.3390/ijms232112840
_version_ 1784829472346734592
author Jin, Qianqian
Huo, Chuncao
Yang, Wenhao
Jin, Kaidi
Cai, Shuai
Zheng, Yanxin
Huang, Baoyu
Wei, Lei
Zhang, Meiwei
Han, Yijing
Zhang, Xuekai
Liu, Yaqiong
Wang, Xiaotong
author_facet Jin, Qianqian
Huo, Chuncao
Yang, Wenhao
Jin, Kaidi
Cai, Shuai
Zheng, Yanxin
Huang, Baoyu
Wei, Lei
Zhang, Meiwei
Han, Yijing
Zhang, Xuekai
Liu, Yaqiong
Wang, Xiaotong
author_sort Jin, Qianqian
collection PubMed
description Retinoic acid (RA) plays important roles in various biological processes in animals. RA signaling is mediated by two types of nuclear receptors, namely retinoic acid receptor (RAR) and retinoid x receptor (RXR), which regulate gene expression by binding to retinoic acid response elements (RAREs) in the promoters of target genes. Here, we explored the effect of all-trans retinoic acid (ATRA) on the Pacific oyster Crassostera gigas at the transcriptome level. A total of 586 differentially expressed genes (DEGs) were identified in C. gigas upon ATRA treatment, with 309 upregulated and 277 downregulated genes. Bioinformatic analysis revealed that ATRA affects the development, metabolism, reproduction, and immunity of C. gigas. Four tyrosinase genes, including Tyr-6 (LOC105331209), Tyr-9 (LOC105346503), Tyr-20 (LOC105330910), and Tyr-12 (LOC105320007), were upregulated by ATRA according to the transcriptome data and these results were verified by real-time quantitative polymerase chain reaction (RT-qPCR) analysis. In addition, increased expression of Tyr (a melanin-related TYR gene in C. gigas) and Tyr-2 were detected after ATRA treatment. The yeast one-hybrid assay revealed the DNA-binding activity of the RA receptors CgRAR and CgRXR, and the interaction of CgRAR with RARE present in the Tyr-2 promoter. These results provide evidence for the further studies on the role of ATRA and the mechanism of RA receptors in mollusks.
format Online
Article
Text
id pubmed-9656583
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-96565832022-11-15 Regulation of Tyrosinase Gene Expression by Retinoic Acid Pathway in the Pacific Oyster Crassostrea gigas Jin, Qianqian Huo, Chuncao Yang, Wenhao Jin, Kaidi Cai, Shuai Zheng, Yanxin Huang, Baoyu Wei, Lei Zhang, Meiwei Han, Yijing Zhang, Xuekai Liu, Yaqiong Wang, Xiaotong Int J Mol Sci Communication Retinoic acid (RA) plays important roles in various biological processes in animals. RA signaling is mediated by two types of nuclear receptors, namely retinoic acid receptor (RAR) and retinoid x receptor (RXR), which regulate gene expression by binding to retinoic acid response elements (RAREs) in the promoters of target genes. Here, we explored the effect of all-trans retinoic acid (ATRA) on the Pacific oyster Crassostera gigas at the transcriptome level. A total of 586 differentially expressed genes (DEGs) were identified in C. gigas upon ATRA treatment, with 309 upregulated and 277 downregulated genes. Bioinformatic analysis revealed that ATRA affects the development, metabolism, reproduction, and immunity of C. gigas. Four tyrosinase genes, including Tyr-6 (LOC105331209), Tyr-9 (LOC105346503), Tyr-20 (LOC105330910), and Tyr-12 (LOC105320007), were upregulated by ATRA according to the transcriptome data and these results were verified by real-time quantitative polymerase chain reaction (RT-qPCR) analysis. In addition, increased expression of Tyr (a melanin-related TYR gene in C. gigas) and Tyr-2 were detected after ATRA treatment. The yeast one-hybrid assay revealed the DNA-binding activity of the RA receptors CgRAR and CgRXR, and the interaction of CgRAR with RARE present in the Tyr-2 promoter. These results provide evidence for the further studies on the role of ATRA and the mechanism of RA receptors in mollusks. MDPI 2022-10-25 /pmc/articles/PMC9656583/ /pubmed/36361629 http://dx.doi.org/10.3390/ijms232112840 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Jin, Qianqian
Huo, Chuncao
Yang, Wenhao
Jin, Kaidi
Cai, Shuai
Zheng, Yanxin
Huang, Baoyu
Wei, Lei
Zhang, Meiwei
Han, Yijing
Zhang, Xuekai
Liu, Yaqiong
Wang, Xiaotong
Regulation of Tyrosinase Gene Expression by Retinoic Acid Pathway in the Pacific Oyster Crassostrea gigas
title Regulation of Tyrosinase Gene Expression by Retinoic Acid Pathway in the Pacific Oyster Crassostrea gigas
title_full Regulation of Tyrosinase Gene Expression by Retinoic Acid Pathway in the Pacific Oyster Crassostrea gigas
title_fullStr Regulation of Tyrosinase Gene Expression by Retinoic Acid Pathway in the Pacific Oyster Crassostrea gigas
title_full_unstemmed Regulation of Tyrosinase Gene Expression by Retinoic Acid Pathway in the Pacific Oyster Crassostrea gigas
title_short Regulation of Tyrosinase Gene Expression by Retinoic Acid Pathway in the Pacific Oyster Crassostrea gigas
title_sort regulation of tyrosinase gene expression by retinoic acid pathway in the pacific oyster crassostrea gigas
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9656583/
https://www.ncbi.nlm.nih.gov/pubmed/36361629
http://dx.doi.org/10.3390/ijms232112840
work_keys_str_mv AT jinqianqian regulationoftyrosinasegeneexpressionbyretinoicacidpathwayinthepacificoystercrassostreagigas
AT huochuncao regulationoftyrosinasegeneexpressionbyretinoicacidpathwayinthepacificoystercrassostreagigas
AT yangwenhao regulationoftyrosinasegeneexpressionbyretinoicacidpathwayinthepacificoystercrassostreagigas
AT jinkaidi regulationoftyrosinasegeneexpressionbyretinoicacidpathwayinthepacificoystercrassostreagigas
AT caishuai regulationoftyrosinasegeneexpressionbyretinoicacidpathwayinthepacificoystercrassostreagigas
AT zhengyanxin regulationoftyrosinasegeneexpressionbyretinoicacidpathwayinthepacificoystercrassostreagigas
AT huangbaoyu regulationoftyrosinasegeneexpressionbyretinoicacidpathwayinthepacificoystercrassostreagigas
AT weilei regulationoftyrosinasegeneexpressionbyretinoicacidpathwayinthepacificoystercrassostreagigas
AT zhangmeiwei regulationoftyrosinasegeneexpressionbyretinoicacidpathwayinthepacificoystercrassostreagigas
AT hanyijing regulationoftyrosinasegeneexpressionbyretinoicacidpathwayinthepacificoystercrassostreagigas
AT zhangxuekai regulationoftyrosinasegeneexpressionbyretinoicacidpathwayinthepacificoystercrassostreagigas
AT liuyaqiong regulationoftyrosinasegeneexpressionbyretinoicacidpathwayinthepacificoystercrassostreagigas
AT wangxiaotong regulationoftyrosinasegeneexpressionbyretinoicacidpathwayinthepacificoystercrassostreagigas