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A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime

The C–X bond cleavage in different methyl halides (CH(3)X; X = Cl, Br, I) mediated by 5,6-dimethylbenzimidazole-bis(dimethylglyoximate)cobalt(II) (Co(II)Cbx) was theoretically investigated in the present work. An S(N)2-like mechanism was considered to simulate the chemical process where the cobalt a...

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Autores principales: Seijas, Luis E., Zambrano, Cesar H., Rodríguez, Vladimir, Alí-Torres, Jorge, Rincón, Luis, Torres, F. Javier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
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Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9658964/
https://www.ncbi.nlm.nih.gov/pubmed/36364105
http://dx.doi.org/10.3390/molecules27217283
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author Seijas, Luis E.
Zambrano, Cesar H.
Rodríguez, Vladimir
Alí-Torres, Jorge
Rincón, Luis
Torres, F. Javier
author_facet Seijas, Luis E.
Zambrano, Cesar H.
Rodríguez, Vladimir
Alí-Torres, Jorge
Rincón, Luis
Torres, F. Javier
author_sort Seijas, Luis E.
collection PubMed
description The C–X bond cleavage in different methyl halides (CH(3)X; X = Cl, Br, I) mediated by 5,6-dimethylbenzimidazole-bis(dimethylglyoximate)cobalt(II) (Co(II)Cbx) was theoretically investigated in the present work. An S(N)2-like mechanism was considered to simulate the chemical process where the cobalt atom acts as the nucleophile and the halogen as the leaving group. The reaction path was computed by means of the intrinsic reaction coordinate method and analyzed in detail through the reaction force formalism, the quantum theory of atoms in molecules (QTAIM), and the calculation of one-electron density derived quantities, such as the source function (SF) and the spin density. A thorough comparison of the results with those obtained in the same reaction occurring in presence of 5,6-dimethylbenzimidazole-bis(dimethylglyoximate)cobalt(I) (Co(I)Cbx) was conducted to reveal the main differences between the two cases. The reactions mediated by Co(II)Cbx were observed to be endothermic and possess higher activation energies in contrast to the reactions where the Co(I)Cbx complex is present. The latter was supported by the reaction force results, which suggest a relationship between the activation energy and the ionization potentials of the different nucleophiles present in the cleavage reaction. Moreover, the SF results indicates that the lower axial ligand (i.e., 5,6-dimethylbenzimidazole) exclusively participates on the first stage of the reaction mediated by the Co(II)Cbx complex, while for the Co(I)Cbx case, it appears to have an important role along the whole process. Finally, the QTAIM charge analysis indicates that oxidation of the cobalt atom occurs in both cases; at the same time, it suggests the formation of an uncommon two-center one-electron bond in the Co(II)Cbx case. The latter was confirmed by means of electron localization calculations, which resulted in a larger electron count at the Co–C interatomic region for the Co(I)Cbx case upon comparison with its Co(II)Cbx counterpart.
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spelling pubmed-96589642022-11-15 A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime Seijas, Luis E. Zambrano, Cesar H. Rodríguez, Vladimir Alí-Torres, Jorge Rincón, Luis Torres, F. Javier Molecules Article The C–X bond cleavage in different methyl halides (CH(3)X; X = Cl, Br, I) mediated by 5,6-dimethylbenzimidazole-bis(dimethylglyoximate)cobalt(II) (Co(II)Cbx) was theoretically investigated in the present work. An S(N)2-like mechanism was considered to simulate the chemical process where the cobalt atom acts as the nucleophile and the halogen as the leaving group. The reaction path was computed by means of the intrinsic reaction coordinate method and analyzed in detail through the reaction force formalism, the quantum theory of atoms in molecules (QTAIM), and the calculation of one-electron density derived quantities, such as the source function (SF) and the spin density. A thorough comparison of the results with those obtained in the same reaction occurring in presence of 5,6-dimethylbenzimidazole-bis(dimethylglyoximate)cobalt(I) (Co(I)Cbx) was conducted to reveal the main differences between the two cases. The reactions mediated by Co(II)Cbx were observed to be endothermic and possess higher activation energies in contrast to the reactions where the Co(I)Cbx complex is present. The latter was supported by the reaction force results, which suggest a relationship between the activation energy and the ionization potentials of the different nucleophiles present in the cleavage reaction. Moreover, the SF results indicates that the lower axial ligand (i.e., 5,6-dimethylbenzimidazole) exclusively participates on the first stage of the reaction mediated by the Co(II)Cbx complex, while for the Co(I)Cbx case, it appears to have an important role along the whole process. Finally, the QTAIM charge analysis indicates that oxidation of the cobalt atom occurs in both cases; at the same time, it suggests the formation of an uncommon two-center one-electron bond in the Co(II)Cbx case. The latter was confirmed by means of electron localization calculations, which resulted in a larger electron count at the Co–C interatomic region for the Co(I)Cbx case upon comparison with its Co(II)Cbx counterpart. MDPI 2022-10-26 /pmc/articles/PMC9658964/ /pubmed/36364105 http://dx.doi.org/10.3390/molecules27217283 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Seijas, Luis E.
Zambrano, Cesar H.
Rodríguez, Vladimir
Alí-Torres, Jorge
Rincón, Luis
Torres, F. Javier
A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime
title A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime
title_full A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime
title_fullStr A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime
title_full_unstemmed A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime
title_short A Theoretical Study of the C–X Bond Cleavage Mediated by Cob(II)Aloxime
title_sort theoretical study of the c–x bond cleavage mediated by cob(ii)aloxime
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9658964/
https://www.ncbi.nlm.nih.gov/pubmed/36364105
http://dx.doi.org/10.3390/molecules27217283
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