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Fragment Optimization of Reversible Binding to the Switch II Pocket on KRAS Leads to a Potent, In Vivo Active KRAS(G12C) Inhibitor

[Image: see text] Activating mutations in KRAS are the most frequent oncogenic alterations in cancer. The oncogenic hotspot position 12, located at the lip of the switch II pocket, offers a covalent attachment point for KRAS(G12C) inhibitors. To date, KRAS(G12C) inhibitors have been discovered by fi...

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Autores principales: Bröker, Joachim, Waterson, Alex G., Smethurst, Chris, Kessler, Dirk, Böttcher, Jark, Mayer, Moriz, Gmaschitz, Gerhard, Phan, Jason, Little, Andrew, Abbott, Jason R., Sun, Qi, Gmachl, Michael, Rudolph, Dorothea, Arnhof, Heribert, Rumpel, Klaus, Savarese, Fabio, Gerstberger, Thomas, Mischerikow, Nikolai, Treu, Matthias, Herdeis, Lorenz, Wunberg, Tobias, Gollner, Andreas, Weinstabl, Harald, Mantoulidis, Andreas, Krämer, Oliver, McConnell, Darryl B., W. Fesik, Stephen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9661478/
https://www.ncbi.nlm.nih.gov/pubmed/36300829
http://dx.doi.org/10.1021/acs.jmedchem.2c01120
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author Bröker, Joachim
Waterson, Alex G.
Smethurst, Chris
Kessler, Dirk
Böttcher, Jark
Mayer, Moriz
Gmaschitz, Gerhard
Phan, Jason
Little, Andrew
Abbott, Jason R.
Sun, Qi
Gmachl, Michael
Rudolph, Dorothea
Arnhof, Heribert
Rumpel, Klaus
Savarese, Fabio
Gerstberger, Thomas
Mischerikow, Nikolai
Treu, Matthias
Herdeis, Lorenz
Wunberg, Tobias
Gollner, Andreas
Weinstabl, Harald
Mantoulidis, Andreas
Krämer, Oliver
McConnell, Darryl B.
W. Fesik, Stephen
author_facet Bröker, Joachim
Waterson, Alex G.
Smethurst, Chris
Kessler, Dirk
Böttcher, Jark
Mayer, Moriz
Gmaschitz, Gerhard
Phan, Jason
Little, Andrew
Abbott, Jason R.
Sun, Qi
Gmachl, Michael
Rudolph, Dorothea
Arnhof, Heribert
Rumpel, Klaus
Savarese, Fabio
Gerstberger, Thomas
Mischerikow, Nikolai
Treu, Matthias
Herdeis, Lorenz
Wunberg, Tobias
Gollner, Andreas
Weinstabl, Harald
Mantoulidis, Andreas
Krämer, Oliver
McConnell, Darryl B.
W. Fesik, Stephen
author_sort Bröker, Joachim
collection PubMed
description [Image: see text] Activating mutations in KRAS are the most frequent oncogenic alterations in cancer. The oncogenic hotspot position 12, located at the lip of the switch II pocket, offers a covalent attachment point for KRAS(G12C) inhibitors. To date, KRAS(G12C) inhibitors have been discovered by first covalently binding to the cysteine at position 12 and then optimizing pocket binding. We report on the discovery of the in vivo active KRAS(G12C) inhibitor BI-0474 using a different approach, in which small molecules that bind reversibly to the switch II pocket were identified and then optimized for non-covalent binding using structure-based design. Finally, the Michael acceptor containing warhead was attached. Our approach offers not only an alternative approach to discovering KRAS(G12C) inhibitors but also provides a starting point for the discovery of inhibitors against other oncogenic KRAS mutants.
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spelling pubmed-96614782022-11-15 Fragment Optimization of Reversible Binding to the Switch II Pocket on KRAS Leads to a Potent, In Vivo Active KRAS(G12C) Inhibitor Bröker, Joachim Waterson, Alex G. Smethurst, Chris Kessler, Dirk Böttcher, Jark Mayer, Moriz Gmaschitz, Gerhard Phan, Jason Little, Andrew Abbott, Jason R. Sun, Qi Gmachl, Michael Rudolph, Dorothea Arnhof, Heribert Rumpel, Klaus Savarese, Fabio Gerstberger, Thomas Mischerikow, Nikolai Treu, Matthias Herdeis, Lorenz Wunberg, Tobias Gollner, Andreas Weinstabl, Harald Mantoulidis, Andreas Krämer, Oliver McConnell, Darryl B. W. Fesik, Stephen J Med Chem [Image: see text] Activating mutations in KRAS are the most frequent oncogenic alterations in cancer. The oncogenic hotspot position 12, located at the lip of the switch II pocket, offers a covalent attachment point for KRAS(G12C) inhibitors. To date, KRAS(G12C) inhibitors have been discovered by first covalently binding to the cysteine at position 12 and then optimizing pocket binding. We report on the discovery of the in vivo active KRAS(G12C) inhibitor BI-0474 using a different approach, in which small molecules that bind reversibly to the switch II pocket were identified and then optimized for non-covalent binding using structure-based design. Finally, the Michael acceptor containing warhead was attached. Our approach offers not only an alternative approach to discovering KRAS(G12C) inhibitors but also provides a starting point for the discovery of inhibitors against other oncogenic KRAS mutants. American Chemical Society 2022-10-27 2022-11-10 /pmc/articles/PMC9661478/ /pubmed/36300829 http://dx.doi.org/10.1021/acs.jmedchem.2c01120 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Bröker, Joachim
Waterson, Alex G.
Smethurst, Chris
Kessler, Dirk
Böttcher, Jark
Mayer, Moriz
Gmaschitz, Gerhard
Phan, Jason
Little, Andrew
Abbott, Jason R.
Sun, Qi
Gmachl, Michael
Rudolph, Dorothea
Arnhof, Heribert
Rumpel, Klaus
Savarese, Fabio
Gerstberger, Thomas
Mischerikow, Nikolai
Treu, Matthias
Herdeis, Lorenz
Wunberg, Tobias
Gollner, Andreas
Weinstabl, Harald
Mantoulidis, Andreas
Krämer, Oliver
McConnell, Darryl B.
W. Fesik, Stephen
Fragment Optimization of Reversible Binding to the Switch II Pocket on KRAS Leads to a Potent, In Vivo Active KRAS(G12C) Inhibitor
title Fragment Optimization of Reversible Binding to the Switch II Pocket on KRAS Leads to a Potent, In Vivo Active KRAS(G12C) Inhibitor
title_full Fragment Optimization of Reversible Binding to the Switch II Pocket on KRAS Leads to a Potent, In Vivo Active KRAS(G12C) Inhibitor
title_fullStr Fragment Optimization of Reversible Binding to the Switch II Pocket on KRAS Leads to a Potent, In Vivo Active KRAS(G12C) Inhibitor
title_full_unstemmed Fragment Optimization of Reversible Binding to the Switch II Pocket on KRAS Leads to a Potent, In Vivo Active KRAS(G12C) Inhibitor
title_short Fragment Optimization of Reversible Binding to the Switch II Pocket on KRAS Leads to a Potent, In Vivo Active KRAS(G12C) Inhibitor
title_sort fragment optimization of reversible binding to the switch ii pocket on kras leads to a potent, in vivo active kras(g12c) inhibitor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9661478/
https://www.ncbi.nlm.nih.gov/pubmed/36300829
http://dx.doi.org/10.1021/acs.jmedchem.2c01120
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