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Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis

Papillary thyroid carcinoma (PTC) accounts for approximately 80% of all human thyroid malignancies. Recently, there has been a dramatic rise in the prevalence of thyroid cancer all over the globe. Through analysis of the GEO database, GSE104005, the authors of the current research were able to deter...

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Autores principales: Valizadeh, Sepehr, Zehtabi, Mojtaba, Feiziordaklou, Neda, Akbarpour, Zahra, Khamaneh, Amir Mahdi, Raeisi, Mortaza
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Shiraz University 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9661674/
https://www.ncbi.nlm.nih.gov/pubmed/36718241
http://dx.doi.org/10.22099/mbrc.2022.43947.1757
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author Valizadeh, Sepehr
Zehtabi, Mojtaba
Feiziordaklou, Neda
Akbarpour, Zahra
Khamaneh, Amir Mahdi
Raeisi, Mortaza
author_facet Valizadeh, Sepehr
Zehtabi, Mojtaba
Feiziordaklou, Neda
Akbarpour, Zahra
Khamaneh, Amir Mahdi
Raeisi, Mortaza
author_sort Valizadeh, Sepehr
collection PubMed
description Papillary thyroid carcinoma (PTC) accounts for approximately 80% of all human thyroid malignancies. Recently, there has been a dramatic rise in the prevalence of thyroid cancer all over the globe. Through analysis of the GEO database, GSE104005, the authors of the current research were able to determine the differential expression of microRNAs (DEMs) as well as their target genes. Real-time PCR was used on a total of 40 samples, 40 of which were from PTC samples and 40 from normal tissues, in order to validate the discovered DEMs and the genes. Gene Ontology (GO) categories were identified, and KEGG was used to conduct pathway enrichment analysis. The multiMiR R package was used to predict target genes of DEMs. Mir-142 was found to be overexpressed in PTC samples, as compared to normal tissues, and this was validated by the identification and validation. In addition, metal ion binding and the cellular response to metal ions were identified as essential pathways in the carcinogenesis of PTC. This demonstrates their significance in the development of this malignancy. The results of our research will serve as the foundation for further research in the area of miRNA-based cancer treatment.
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spelling pubmed-96616742023-01-29 Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis Valizadeh, Sepehr Zehtabi, Mojtaba Feiziordaklou, Neda Akbarpour, Zahra Khamaneh, Amir Mahdi Raeisi, Mortaza Mol Biol Res Commun Original Article Papillary thyroid carcinoma (PTC) accounts for approximately 80% of all human thyroid malignancies. Recently, there has been a dramatic rise in the prevalence of thyroid cancer all over the globe. Through analysis of the GEO database, GSE104005, the authors of the current research were able to determine the differential expression of microRNAs (DEMs) as well as their target genes. Real-time PCR was used on a total of 40 samples, 40 of which were from PTC samples and 40 from normal tissues, in order to validate the discovered DEMs and the genes. Gene Ontology (GO) categories were identified, and KEGG was used to conduct pathway enrichment analysis. The multiMiR R package was used to predict target genes of DEMs. Mir-142 was found to be overexpressed in PTC samples, as compared to normal tissues, and this was validated by the identification and validation. In addition, metal ion binding and the cellular response to metal ions were identified as essential pathways in the carcinogenesis of PTC. This demonstrates their significance in the development of this malignancy. The results of our research will serve as the foundation for further research in the area of miRNA-based cancer treatment. Shiraz University 2022 /pmc/articles/PMC9661674/ /pubmed/36718241 http://dx.doi.org/10.22099/mbrc.2022.43947.1757 Text en https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution 4.0 License (https://creativecommons.org/licenses/by/4.0/)
spellingShingle Original Article
Valizadeh, Sepehr
Zehtabi, Mojtaba
Feiziordaklou, Neda
Akbarpour, Zahra
Khamaneh, Amir Mahdi
Raeisi, Mortaza
Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis
title Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis
title_full Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis
title_fullStr Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis
title_full_unstemmed Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis
title_short Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis
title_sort upregulation of mir-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9661674/
https://www.ncbi.nlm.nih.gov/pubmed/36718241
http://dx.doi.org/10.22099/mbrc.2022.43947.1757
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