Cargando…
Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis
Papillary thyroid carcinoma (PTC) accounts for approximately 80% of all human thyroid malignancies. Recently, there has been a dramatic rise in the prevalence of thyroid cancer all over the globe. Through analysis of the GEO database, GSE104005, the authors of the current research were able to deter...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Shiraz University
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9661674/ https://www.ncbi.nlm.nih.gov/pubmed/36718241 http://dx.doi.org/10.22099/mbrc.2022.43947.1757 |
_version_ | 1784830530674491392 |
---|---|
author | Valizadeh, Sepehr Zehtabi, Mojtaba Feiziordaklou, Neda Akbarpour, Zahra Khamaneh, Amir Mahdi Raeisi, Mortaza |
author_facet | Valizadeh, Sepehr Zehtabi, Mojtaba Feiziordaklou, Neda Akbarpour, Zahra Khamaneh, Amir Mahdi Raeisi, Mortaza |
author_sort | Valizadeh, Sepehr |
collection | PubMed |
description | Papillary thyroid carcinoma (PTC) accounts for approximately 80% of all human thyroid malignancies. Recently, there has been a dramatic rise in the prevalence of thyroid cancer all over the globe. Through analysis of the GEO database, GSE104005, the authors of the current research were able to determine the differential expression of microRNAs (DEMs) as well as their target genes. Real-time PCR was used on a total of 40 samples, 40 of which were from PTC samples and 40 from normal tissues, in order to validate the discovered DEMs and the genes. Gene Ontology (GO) categories were identified, and KEGG was used to conduct pathway enrichment analysis. The multiMiR R package was used to predict target genes of DEMs. Mir-142 was found to be overexpressed in PTC samples, as compared to normal tissues, and this was validated by the identification and validation. In addition, metal ion binding and the cellular response to metal ions were identified as essential pathways in the carcinogenesis of PTC. This demonstrates their significance in the development of this malignancy. The results of our research will serve as the foundation for further research in the area of miRNA-based cancer treatment. |
format | Online Article Text |
id | pubmed-9661674 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Shiraz University |
record_format | MEDLINE/PubMed |
spelling | pubmed-96616742023-01-29 Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis Valizadeh, Sepehr Zehtabi, Mojtaba Feiziordaklou, Neda Akbarpour, Zahra Khamaneh, Amir Mahdi Raeisi, Mortaza Mol Biol Res Commun Original Article Papillary thyroid carcinoma (PTC) accounts for approximately 80% of all human thyroid malignancies. Recently, there has been a dramatic rise in the prevalence of thyroid cancer all over the globe. Through analysis of the GEO database, GSE104005, the authors of the current research were able to determine the differential expression of microRNAs (DEMs) as well as their target genes. Real-time PCR was used on a total of 40 samples, 40 of which were from PTC samples and 40 from normal tissues, in order to validate the discovered DEMs and the genes. Gene Ontology (GO) categories were identified, and KEGG was used to conduct pathway enrichment analysis. The multiMiR R package was used to predict target genes of DEMs. Mir-142 was found to be overexpressed in PTC samples, as compared to normal tissues, and this was validated by the identification and validation. In addition, metal ion binding and the cellular response to metal ions were identified as essential pathways in the carcinogenesis of PTC. This demonstrates their significance in the development of this malignancy. The results of our research will serve as the foundation for further research in the area of miRNA-based cancer treatment. Shiraz University 2022 /pmc/articles/PMC9661674/ /pubmed/36718241 http://dx.doi.org/10.22099/mbrc.2022.43947.1757 Text en https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution 4.0 License (https://creativecommons.org/licenses/by/4.0/) |
spellingShingle | Original Article Valizadeh, Sepehr Zehtabi, Mojtaba Feiziordaklou, Neda Akbarpour, Zahra Khamaneh, Amir Mahdi Raeisi, Mortaza Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis |
title | Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis |
title_full | Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis |
title_fullStr | Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis |
title_full_unstemmed | Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis |
title_short | Upregulation of miR-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis |
title_sort | upregulation of mir-142 in papillary thyroid carcinoma tissues: a report based on in silico and in vitro analysis |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9661674/ https://www.ncbi.nlm.nih.gov/pubmed/36718241 http://dx.doi.org/10.22099/mbrc.2022.43947.1757 |
work_keys_str_mv | AT valizadehsepehr upregulationofmir142inpapillarythyroidcarcinomatissuesareportbasedoninsilicoandinvitroanalysis AT zehtabimojtaba upregulationofmir142inpapillarythyroidcarcinomatissuesareportbasedoninsilicoandinvitroanalysis AT feiziordaklouneda upregulationofmir142inpapillarythyroidcarcinomatissuesareportbasedoninsilicoandinvitroanalysis AT akbarpourzahra upregulationofmir142inpapillarythyroidcarcinomatissuesareportbasedoninsilicoandinvitroanalysis AT khamanehamirmahdi upregulationofmir142inpapillarythyroidcarcinomatissuesareportbasedoninsilicoandinvitroanalysis AT raeisimortaza upregulationofmir142inpapillarythyroidcarcinomatissuesareportbasedoninsilicoandinvitroanalysis |