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The complete chloroplast genome of Korean bred apple ‘Kamhong’ (Malus domestica Borkh.)

Apple (Malus domestica (Suckow) Borkh., 1803) is economically important horticultural fruit crop in the world. In this study, the complete chloroplast genome of Korean apple cultivar ‘Kamhong’ was characterized through the de novo assembly of Illumina sequencing data. The chloroplast genome is a cir...

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Autores principales: Kim, Se Hee, Cho, Kang Hee, Cho, Sang-Yun, Yun, Byeong Hyeon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9661974/
https://www.ncbi.nlm.nih.gov/pubmed/36386023
http://dx.doi.org/10.1080/23802359.2022.2139159
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author Kim, Se Hee
Cho, Kang Hee
Cho, Sang-Yun
Yun, Byeong Hyeon
author_facet Kim, Se Hee
Cho, Kang Hee
Cho, Sang-Yun
Yun, Byeong Hyeon
author_sort Kim, Se Hee
collection PubMed
description Apple (Malus domestica (Suckow) Borkh., 1803) is economically important horticultural fruit crop in the world. In this study, the complete chloroplast genome of Korean apple cultivar ‘Kamhong’ was characterized through the de novo assembly of Illumina sequencing data. The chloroplast genome is a circular molecule of 161,069 bp length with 36.55% GC content and has a total of 112 genes including 78 protein-coding genes, 30 transfer RNA genes, and 4 ribosomal RNA genes. Phylogenetic analysis with protein-coding sequences of chloroplast genome revealed that ‘Kamhong’ was closely grouped with M. domestica cultivars reported in China. The genomic data generated in this study can extend a molecular basis for phylogenetic relationships of Korean cultivar ‘Kamhong’ with other M. domestica cultivars bred in other countries.
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spelling pubmed-96619742022-11-15 The complete chloroplast genome of Korean bred apple ‘Kamhong’ (Malus domestica Borkh.) Kim, Se Hee Cho, Kang Hee Cho, Sang-Yun Yun, Byeong Hyeon Mitochondrial DNA B Resour Plastome Announcement Apple (Malus domestica (Suckow) Borkh., 1803) is economically important horticultural fruit crop in the world. In this study, the complete chloroplast genome of Korean apple cultivar ‘Kamhong’ was characterized through the de novo assembly of Illumina sequencing data. The chloroplast genome is a circular molecule of 161,069 bp length with 36.55% GC content and has a total of 112 genes including 78 protein-coding genes, 30 transfer RNA genes, and 4 ribosomal RNA genes. Phylogenetic analysis with protein-coding sequences of chloroplast genome revealed that ‘Kamhong’ was closely grouped with M. domestica cultivars reported in China. The genomic data generated in this study can extend a molecular basis for phylogenetic relationships of Korean cultivar ‘Kamhong’ with other M. domestica cultivars bred in other countries. Taylor & Francis 2022-11-11 /pmc/articles/PMC9661974/ /pubmed/36386023 http://dx.doi.org/10.1080/23802359.2022.2139159 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Kim, Se Hee
Cho, Kang Hee
Cho, Sang-Yun
Yun, Byeong Hyeon
The complete chloroplast genome of Korean bred apple ‘Kamhong’ (Malus domestica Borkh.)
title The complete chloroplast genome of Korean bred apple ‘Kamhong’ (Malus domestica Borkh.)
title_full The complete chloroplast genome of Korean bred apple ‘Kamhong’ (Malus domestica Borkh.)
title_fullStr The complete chloroplast genome of Korean bred apple ‘Kamhong’ (Malus domestica Borkh.)
title_full_unstemmed The complete chloroplast genome of Korean bred apple ‘Kamhong’ (Malus domestica Borkh.)
title_short The complete chloroplast genome of Korean bred apple ‘Kamhong’ (Malus domestica Borkh.)
title_sort complete chloroplast genome of korean bred apple ‘kamhong’ (malus domestica borkh.)
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9661974/
https://www.ncbi.nlm.nih.gov/pubmed/36386023
http://dx.doi.org/10.1080/23802359.2022.2139159
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