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Comprehensive analysis of lysine lactylation in Frankliniella occidentalis
Western flower thrips (Frankliniella occidentalis) are among the most important pests globally that transmit destructive plant viruses and infest multiple commercial crops. Lysine lactylation (Klac) is a recently discovered novel post-translational modification (PTM). We used liquid chromatography-m...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9663987/ https://www.ncbi.nlm.nih.gov/pubmed/36386791 http://dx.doi.org/10.3389/fgene.2022.1014225 |
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author | An, Dong Song, Liyun Li, Ying Shen, Lili Miao, Pu Wang, Yujie Liu, Dongyang Jiang, Lianqiang Wang, Fenglong Yang, Jinguang |
author_facet | An, Dong Song, Liyun Li, Ying Shen, Lili Miao, Pu Wang, Yujie Liu, Dongyang Jiang, Lianqiang Wang, Fenglong Yang, Jinguang |
author_sort | An, Dong |
collection | PubMed |
description | Western flower thrips (Frankliniella occidentalis) are among the most important pests globally that transmit destructive plant viruses and infest multiple commercial crops. Lysine lactylation (Klac) is a recently discovered novel post-translational modification (PTM). We used liquid chromatography-mass spectrometry to identify the global lactylated proteome of F. occidentalis, and further enriched the identified lactylated proteins using Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO). In the present study, we identified 1,458 Klac sites in 469 proteins from F. occidentalis. Bioinformatics analysis showed that Klac was widely distributed in F. occidentalis proteins, and these Klac modified proteins participated in multiple biological processes. GO and KEGG enrichment analysis revealed that Klac proteins were significantly enriched in multiple cellular compartments and metabolic pathways, such as the ribosome and carbon metabolism pathways. Two Klac proteins were found to be involved in the regulation of the TSWV (Tomato spotted wilt virus) transmission in F. occidentalis. This study provides a systematic report and a rich dataset of lactylation in F. occidentalis proteome for potential studies on the Klac protein of this notorious pest. |
format | Online Article Text |
id | pubmed-9663987 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96639872022-11-15 Comprehensive analysis of lysine lactylation in Frankliniella occidentalis An, Dong Song, Liyun Li, Ying Shen, Lili Miao, Pu Wang, Yujie Liu, Dongyang Jiang, Lianqiang Wang, Fenglong Yang, Jinguang Front Genet Genetics Western flower thrips (Frankliniella occidentalis) are among the most important pests globally that transmit destructive plant viruses and infest multiple commercial crops. Lysine lactylation (Klac) is a recently discovered novel post-translational modification (PTM). We used liquid chromatography-mass spectrometry to identify the global lactylated proteome of F. occidentalis, and further enriched the identified lactylated proteins using Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO). In the present study, we identified 1,458 Klac sites in 469 proteins from F. occidentalis. Bioinformatics analysis showed that Klac was widely distributed in F. occidentalis proteins, and these Klac modified proteins participated in multiple biological processes. GO and KEGG enrichment analysis revealed that Klac proteins were significantly enriched in multiple cellular compartments and metabolic pathways, such as the ribosome and carbon metabolism pathways. Two Klac proteins were found to be involved in the regulation of the TSWV (Tomato spotted wilt virus) transmission in F. occidentalis. This study provides a systematic report and a rich dataset of lactylation in F. occidentalis proteome for potential studies on the Klac protein of this notorious pest. Frontiers Media S.A. 2022-11-01 /pmc/articles/PMC9663987/ /pubmed/36386791 http://dx.doi.org/10.3389/fgene.2022.1014225 Text en Copyright © 2022 An, Song, Li, Shen, Miao, Wang, Liu, Jiang, Wang and Yang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics An, Dong Song, Liyun Li, Ying Shen, Lili Miao, Pu Wang, Yujie Liu, Dongyang Jiang, Lianqiang Wang, Fenglong Yang, Jinguang Comprehensive analysis of lysine lactylation in Frankliniella occidentalis |
title | Comprehensive analysis of lysine lactylation in Frankliniella occidentalis
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title_full | Comprehensive analysis of lysine lactylation in Frankliniella occidentalis
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title_fullStr | Comprehensive analysis of lysine lactylation in Frankliniella occidentalis
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title_full_unstemmed | Comprehensive analysis of lysine lactylation in Frankliniella occidentalis
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title_short | Comprehensive analysis of lysine lactylation in Frankliniella occidentalis
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title_sort | comprehensive analysis of lysine lactylation in frankliniella occidentalis |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9663987/ https://www.ncbi.nlm.nih.gov/pubmed/36386791 http://dx.doi.org/10.3389/fgene.2022.1014225 |
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