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Identifying C. elegans lifespan mutants by screening for early-onset protein aggregation
Genetic screens are widely used to identify genes that control specific biological functions. In Caenorhabditis elegans, forward genetic screens rely on the isolation of reproductively active mutants that can self-propagate clonal populations. Screens that target post-reproductive phenotypes, such a...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9664360/ https://www.ncbi.nlm.nih.gov/pubmed/36388964 http://dx.doi.org/10.1016/j.isci.2022.105460 |
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author | Midkiff, Daniel F. Huayta, Javier Lichty, James D. Crapster, Joseph P. San-Miguel, Adriana |
author_facet | Midkiff, Daniel F. Huayta, Javier Lichty, James D. Crapster, Joseph P. San-Miguel, Adriana |
author_sort | Midkiff, Daniel F. |
collection | PubMed |
description | Genetic screens are widely used to identify genes that control specific biological functions. In Caenorhabditis elegans, forward genetic screens rely on the isolation of reproductively active mutants that can self-propagate clonal populations. Screens that target post-reproductive phenotypes, such as lifespan, are thus challenging. We combine microfluidic technologies and image processing to perform high-throughput automated screening for short-lived mutants using protein aggregation as a marker for aging. We take advantage of microfluidics for maintaining a reproductively active adult mutagenized population and for performing serial high-throughput analysis and sorting of animals with increased protein aggregation, using fluorescently-labeled PAB-1 as a readout. We demonstrate that lifespan mutants can be identified by screening for accelerated protein aggregation through quantitative analysis of fluorescently labeled aggregates while avoiding conditional sterilization or manual separation of parental and progeny populations. We also show that aged wildtypes and premature aggregation mutants differ in aggregate morphology, suggesting aggregate growth is time-dependent. |
format | Online Article Text |
id | pubmed-9664360 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-96643602022-11-15 Identifying C. elegans lifespan mutants by screening for early-onset protein aggregation Midkiff, Daniel F. Huayta, Javier Lichty, James D. Crapster, Joseph P. San-Miguel, Adriana iScience Article Genetic screens are widely used to identify genes that control specific biological functions. In Caenorhabditis elegans, forward genetic screens rely on the isolation of reproductively active mutants that can self-propagate clonal populations. Screens that target post-reproductive phenotypes, such as lifespan, are thus challenging. We combine microfluidic technologies and image processing to perform high-throughput automated screening for short-lived mutants using protein aggregation as a marker for aging. We take advantage of microfluidics for maintaining a reproductively active adult mutagenized population and for performing serial high-throughput analysis and sorting of animals with increased protein aggregation, using fluorescently-labeled PAB-1 as a readout. We demonstrate that lifespan mutants can be identified by screening for accelerated protein aggregation through quantitative analysis of fluorescently labeled aggregates while avoiding conditional sterilization or manual separation of parental and progeny populations. We also show that aged wildtypes and premature aggregation mutants differ in aggregate morphology, suggesting aggregate growth is time-dependent. Elsevier 2022-10-28 /pmc/articles/PMC9664360/ /pubmed/36388964 http://dx.doi.org/10.1016/j.isci.2022.105460 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Midkiff, Daniel F. Huayta, Javier Lichty, James D. Crapster, Joseph P. San-Miguel, Adriana Identifying C. elegans lifespan mutants by screening for early-onset protein aggregation |
title | Identifying C. elegans lifespan mutants by screening for early-onset protein aggregation |
title_full | Identifying C. elegans lifespan mutants by screening for early-onset protein aggregation |
title_fullStr | Identifying C. elegans lifespan mutants by screening for early-onset protein aggregation |
title_full_unstemmed | Identifying C. elegans lifespan mutants by screening for early-onset protein aggregation |
title_short | Identifying C. elegans lifespan mutants by screening for early-onset protein aggregation |
title_sort | identifying c. elegans lifespan mutants by screening for early-onset protein aggregation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9664360/ https://www.ncbi.nlm.nih.gov/pubmed/36388964 http://dx.doi.org/10.1016/j.isci.2022.105460 |
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