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Identification of potential lncRNA‐miRNA‐mRNA regulatory network contributing to aldosterone‐producing adenoma
Aldosterone‐producing adenoma (APA) is a common cause of secondary hypertension. This study aimed to explore the lncRNA‐miRNA‐mRNA competitive endogenous RNA (ceRNA) network to uncover molecular mechanism underlying APA. The mRNA and lncRNA expression data of APA and adjacent adrenal gland (AAG) fro...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9667512/ https://www.ncbi.nlm.nih.gov/pubmed/36305047 http://dx.doi.org/10.1111/jcmm.17586 |
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author | Bao, Minghui Li, Haotong Li, Jianping |
author_facet | Bao, Minghui Li, Haotong Li, Jianping |
author_sort | Bao, Minghui |
collection | PubMed |
description | Aldosterone‐producing adenoma (APA) is a common cause of secondary hypertension. This study aimed to explore the lncRNA‐miRNA‐mRNA competitive endogenous RNA (ceRNA) network to uncover molecular mechanism underlying APA. The mRNA and lncRNA expression data of APA and adjacent adrenal gland (AAG) from GSE60044, GSE64957 and GSE101894 were obtained from the Gene Expression Omnibus (GEO) database to analyse differentially expressed genes (DEGs) and lncRNAs (DElncs). Hub genes were identified by robust rank aggregation (RRA) and protein–protein interaction (PPI) network analysis. The miRcode and miRWalk network tools were used to construct the ceRNA network. 1526 upregulated and 1512 downregulated DEGs were identified, which are mainly enriched in extracellular matrix and Ca(2) (+)‐related GO terms. In the KEGG pathway analysis, Ca(2+) signalling and the aldosterone synthesis and secretion pathways were enriched. ceRNA network included 2 lncRNAs, 9 miRNAs, and 13 mRNAs. The lncRNAs are MEG3 and LINC00115. The mRNAs included CCND1, TP53, GPRC5B, BMI1, COMMD3‐BMI1, ADAMTS15, STAT3, MMP2, SCN2B, CXCL12, HGF, FOS, and THBS1. Overall, this study conducted a ceRNA regulatory network analysis and identified that 2 lncRNAs and 13 mRNAs may contribute to the development of APA. These findings may provide novel diagnostic and intervention targets for APA. |
format | Online Article Text |
id | pubmed-9667512 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96675122022-11-17 Identification of potential lncRNA‐miRNA‐mRNA regulatory network contributing to aldosterone‐producing adenoma Bao, Minghui Li, Haotong Li, Jianping J Cell Mol Med Original Articles Aldosterone‐producing adenoma (APA) is a common cause of secondary hypertension. This study aimed to explore the lncRNA‐miRNA‐mRNA competitive endogenous RNA (ceRNA) network to uncover molecular mechanism underlying APA. The mRNA and lncRNA expression data of APA and adjacent adrenal gland (AAG) from GSE60044, GSE64957 and GSE101894 were obtained from the Gene Expression Omnibus (GEO) database to analyse differentially expressed genes (DEGs) and lncRNAs (DElncs). Hub genes were identified by robust rank aggregation (RRA) and protein–protein interaction (PPI) network analysis. The miRcode and miRWalk network tools were used to construct the ceRNA network. 1526 upregulated and 1512 downregulated DEGs were identified, which are mainly enriched in extracellular matrix and Ca(2) (+)‐related GO terms. In the KEGG pathway analysis, Ca(2+) signalling and the aldosterone synthesis and secretion pathways were enriched. ceRNA network included 2 lncRNAs, 9 miRNAs, and 13 mRNAs. The lncRNAs are MEG3 and LINC00115. The mRNAs included CCND1, TP53, GPRC5B, BMI1, COMMD3‐BMI1, ADAMTS15, STAT3, MMP2, SCN2B, CXCL12, HGF, FOS, and THBS1. Overall, this study conducted a ceRNA regulatory network analysis and identified that 2 lncRNAs and 13 mRNAs may contribute to the development of APA. These findings may provide novel diagnostic and intervention targets for APA. John Wiley and Sons Inc. 2022-10-27 2022-11 /pmc/articles/PMC9667512/ /pubmed/36305047 http://dx.doi.org/10.1111/jcmm.17586 Text en © 2022 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Bao, Minghui Li, Haotong Li, Jianping Identification of potential lncRNA‐miRNA‐mRNA regulatory network contributing to aldosterone‐producing adenoma |
title | Identification of potential lncRNA‐miRNA‐mRNA regulatory network contributing to aldosterone‐producing adenoma |
title_full | Identification of potential lncRNA‐miRNA‐mRNA regulatory network contributing to aldosterone‐producing adenoma |
title_fullStr | Identification of potential lncRNA‐miRNA‐mRNA regulatory network contributing to aldosterone‐producing adenoma |
title_full_unstemmed | Identification of potential lncRNA‐miRNA‐mRNA regulatory network contributing to aldosterone‐producing adenoma |
title_short | Identification of potential lncRNA‐miRNA‐mRNA regulatory network contributing to aldosterone‐producing adenoma |
title_sort | identification of potential lncrna‐mirna‐mrna regulatory network contributing to aldosterone‐producing adenoma |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9667512/ https://www.ncbi.nlm.nih.gov/pubmed/36305047 http://dx.doi.org/10.1111/jcmm.17586 |
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