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Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causes coronavirus disease 2019 (COVID-19). Imaging tests such as chest X-ray (CXR) and computed tomography (CT) can provide useful information to clinical staff for facilitating a diagnosis of COVID-19 in a more efficient and comprehensiv...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9668167/ https://www.ncbi.nlm.nih.gov/pubmed/36383512 http://dx.doi.org/10.1371/journal.pone.0276250 |
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author | Nwosu, Lucy Li, Xiangfang Qian, Lijun Kim, Seungchan Dong, Xishuang |
author_facet | Nwosu, Lucy Li, Xiangfang Qian, Lijun Kim, Seungchan Dong, Xishuang |
author_sort | Nwosu, Lucy |
collection | PubMed |
description | Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causes coronavirus disease 2019 (COVID-19). Imaging tests such as chest X-ray (CXR) and computed tomography (CT) can provide useful information to clinical staff for facilitating a diagnosis of COVID-19 in a more efficient and comprehensive manner. As a breakthrough of artificial intelligence (AI), deep learning has been applied to perform COVID-19 infection region segmentation and disease classification by analyzing CXR and CT data. However, prediction uncertainty of deep learning models for these tasks, which is very important to safety-critical applications like medical image processing, has not been comprehensively investigated. In this work, we propose a novel ensemble deep learning model through integrating bagging deep learning and model calibration to not only enhance segmentation performance, but also reduce prediction uncertainty. The proposed method has been validated on a large dataset that is associated with CXR image segmentation. Experimental results demonstrate that the proposed method can improve the segmentation performance, as well as decrease prediction uncertainty. |
format | Online Article Text |
id | pubmed-9668167 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-96681672022-11-17 Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image Nwosu, Lucy Li, Xiangfang Qian, Lijun Kim, Seungchan Dong, Xishuang PLoS One Research Article Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causes coronavirus disease 2019 (COVID-19). Imaging tests such as chest X-ray (CXR) and computed tomography (CT) can provide useful information to clinical staff for facilitating a diagnosis of COVID-19 in a more efficient and comprehensive manner. As a breakthrough of artificial intelligence (AI), deep learning has been applied to perform COVID-19 infection region segmentation and disease classification by analyzing CXR and CT data. However, prediction uncertainty of deep learning models for these tasks, which is very important to safety-critical applications like medical image processing, has not been comprehensively investigated. In this work, we propose a novel ensemble deep learning model through integrating bagging deep learning and model calibration to not only enhance segmentation performance, but also reduce prediction uncertainty. The proposed method has been validated on a large dataset that is associated with CXR image segmentation. Experimental results demonstrate that the proposed method can improve the segmentation performance, as well as decrease prediction uncertainty. Public Library of Science 2022-11-16 /pmc/articles/PMC9668167/ /pubmed/36383512 http://dx.doi.org/10.1371/journal.pone.0276250 Text en © 2022 Nwosu et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Nwosu, Lucy Li, Xiangfang Qian, Lijun Kim, Seungchan Dong, Xishuang Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image |
title | Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image |
title_full | Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image |
title_fullStr | Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image |
title_full_unstemmed | Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image |
title_short | Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image |
title_sort | calibrated bagging deep learning for image semantic segmentation: a case study on covid-19 chest x-ray image |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9668167/ https://www.ncbi.nlm.nih.gov/pubmed/36383512 http://dx.doi.org/10.1371/journal.pone.0276250 |
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