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Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causes coronavirus disease 2019 (COVID-19). Imaging tests such as chest X-ray (CXR) and computed tomography (CT) can provide useful information to clinical staff for facilitating a diagnosis of COVID-19 in a more efficient and comprehensiv...

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Detalles Bibliográficos
Autores principales: Nwosu, Lucy, Li, Xiangfang, Qian, Lijun, Kim, Seungchan, Dong, Xishuang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9668167/
https://www.ncbi.nlm.nih.gov/pubmed/36383512
http://dx.doi.org/10.1371/journal.pone.0276250
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author Nwosu, Lucy
Li, Xiangfang
Qian, Lijun
Kim, Seungchan
Dong, Xishuang
author_facet Nwosu, Lucy
Li, Xiangfang
Qian, Lijun
Kim, Seungchan
Dong, Xishuang
author_sort Nwosu, Lucy
collection PubMed
description Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causes coronavirus disease 2019 (COVID-19). Imaging tests such as chest X-ray (CXR) and computed tomography (CT) can provide useful information to clinical staff for facilitating a diagnosis of COVID-19 in a more efficient and comprehensive manner. As a breakthrough of artificial intelligence (AI), deep learning has been applied to perform COVID-19 infection region segmentation and disease classification by analyzing CXR and CT data. However, prediction uncertainty of deep learning models for these tasks, which is very important to safety-critical applications like medical image processing, has not been comprehensively investigated. In this work, we propose a novel ensemble deep learning model through integrating bagging deep learning and model calibration to not only enhance segmentation performance, but also reduce prediction uncertainty. The proposed method has been validated on a large dataset that is associated with CXR image segmentation. Experimental results demonstrate that the proposed method can improve the segmentation performance, as well as decrease prediction uncertainty.
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spelling pubmed-96681672022-11-17 Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image Nwosu, Lucy Li, Xiangfang Qian, Lijun Kim, Seungchan Dong, Xishuang PLoS One Research Article Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causes coronavirus disease 2019 (COVID-19). Imaging tests such as chest X-ray (CXR) and computed tomography (CT) can provide useful information to clinical staff for facilitating a diagnosis of COVID-19 in a more efficient and comprehensive manner. As a breakthrough of artificial intelligence (AI), deep learning has been applied to perform COVID-19 infection region segmentation and disease classification by analyzing CXR and CT data. However, prediction uncertainty of deep learning models for these tasks, which is very important to safety-critical applications like medical image processing, has not been comprehensively investigated. In this work, we propose a novel ensemble deep learning model through integrating bagging deep learning and model calibration to not only enhance segmentation performance, but also reduce prediction uncertainty. The proposed method has been validated on a large dataset that is associated with CXR image segmentation. Experimental results demonstrate that the proposed method can improve the segmentation performance, as well as decrease prediction uncertainty. Public Library of Science 2022-11-16 /pmc/articles/PMC9668167/ /pubmed/36383512 http://dx.doi.org/10.1371/journal.pone.0276250 Text en © 2022 Nwosu et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Nwosu, Lucy
Li, Xiangfang
Qian, Lijun
Kim, Seungchan
Dong, Xishuang
Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image
title Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image
title_full Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image
title_fullStr Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image
title_full_unstemmed Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image
title_short Calibrated bagging deep learning for image semantic segmentation: A case study on COVID-19 chest X-ray image
title_sort calibrated bagging deep learning for image semantic segmentation: a case study on covid-19 chest x-ray image
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9668167/
https://www.ncbi.nlm.nih.gov/pubmed/36383512
http://dx.doi.org/10.1371/journal.pone.0276250
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