Complete chloroplast genome of Isoetes japonica (Isoetaceae)

Isoetes japonica A. Braun is a heterosporous quillwort living in low-altitude areas in Japan. In the present study, the complete chloroplast genome of I. japonica was assembled and annotated. This chloroplast genome is a circular structure of 145,517 bp in length, comprising a pair of inverted repea...

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Detalles Bibliográficos
Autores principales: Lin, Xiaoyan, Gu, Yufeng, Yan, Yuehong, Liu, Baodong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9668274/
https://www.ncbi.nlm.nih.gov/pubmed/36406827
http://dx.doi.org/10.1080/23802359.2021.2005485
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author Lin, Xiaoyan
Gu, Yufeng
Yan, Yuehong
Liu, Baodong
author_facet Lin, Xiaoyan
Gu, Yufeng
Yan, Yuehong
Liu, Baodong
author_sort Lin, Xiaoyan
collection PubMed
description Isoetes japonica A. Braun is a heterosporous quillwort living in low-altitude areas in Japan. In the present study, the complete chloroplast genome of I. japonica was assembled and annotated. This chloroplast genome is a circular structure of 145,517 bp in length, comprising a pair of inverted repeat (IR) regions of 13,204 bp each, a large single copy (LSC) region of 91,868 bp, and a small single copy (SSC) region of 27,241 bp. The chloroplast genome contains 135 genes, including 78 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that I. japonica is sister to I. sinensis and I. yunguiensis. These results provide additional resources for the future studies on Isoetes species.
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spelling pubmed-96682742022-11-17 Complete chloroplast genome of Isoetes japonica (Isoetaceae) Lin, Xiaoyan Gu, Yufeng Yan, Yuehong Liu, Baodong Mitochondrial DNA B Resour Mitogenome Announcement Isoetes japonica A. Braun is a heterosporous quillwort living in low-altitude areas in Japan. In the present study, the complete chloroplast genome of I. japonica was assembled and annotated. This chloroplast genome is a circular structure of 145,517 bp in length, comprising a pair of inverted repeat (IR) regions of 13,204 bp each, a large single copy (LSC) region of 91,868 bp, and a small single copy (SSC) region of 27,241 bp. The chloroplast genome contains 135 genes, including 78 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that I. japonica is sister to I. sinensis and I. yunguiensis. These results provide additional resources for the future studies on Isoetes species. Taylor & Francis 2022-11-15 /pmc/articles/PMC9668274/ /pubmed/36406827 http://dx.doi.org/10.1080/23802359.2021.2005485 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Lin, Xiaoyan
Gu, Yufeng
Yan, Yuehong
Liu, Baodong
Complete chloroplast genome of Isoetes japonica (Isoetaceae)
title Complete chloroplast genome of Isoetes japonica (Isoetaceae)
title_full Complete chloroplast genome of Isoetes japonica (Isoetaceae)
title_fullStr Complete chloroplast genome of Isoetes japonica (Isoetaceae)
title_full_unstemmed Complete chloroplast genome of Isoetes japonica (Isoetaceae)
title_short Complete chloroplast genome of Isoetes japonica (Isoetaceae)
title_sort complete chloroplast genome of isoetes japonica (isoetaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9668274/
https://www.ncbi.nlm.nih.gov/pubmed/36406827
http://dx.doi.org/10.1080/23802359.2021.2005485
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