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Enhanced segmentation of gastrointestinal polyps from capsule endoscopy images with artifacts using ensemble learning

BACKGROUND: Endoscopy artifacts are widespread in real capsule endoscopy (CE) images but not in high-quality standard datasets. AIM: To improve the segmentation performance of polyps from CE images with artifacts based on ensemble learning. METHODS: We collected 277 polyp images with CE artifacts fr...

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Autores principales: Zhou, Jun-Xiao, Yang, Zhan, Xi, Ding-Hao, Dai, Shou-Jun, Feng, Zhi-Qiang, Li, Jun-Yan, Xu, Wei, Wang, Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Baishideng Publishing Group Inc 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9669827/
https://www.ncbi.nlm.nih.gov/pubmed/36405108
http://dx.doi.org/10.3748/wjg.v28.i41.5931
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author Zhou, Jun-Xiao
Yang, Zhan
Xi, Ding-Hao
Dai, Shou-Jun
Feng, Zhi-Qiang
Li, Jun-Yan
Xu, Wei
Wang, Hong
author_facet Zhou, Jun-Xiao
Yang, Zhan
Xi, Ding-Hao
Dai, Shou-Jun
Feng, Zhi-Qiang
Li, Jun-Yan
Xu, Wei
Wang, Hong
author_sort Zhou, Jun-Xiao
collection PubMed
description BACKGROUND: Endoscopy artifacts are widespread in real capsule endoscopy (CE) images but not in high-quality standard datasets. AIM: To improve the segmentation performance of polyps from CE images with artifacts based on ensemble learning. METHODS: We collected 277 polyp images with CE artifacts from 5760 h of videos from 480 patients at Guangzhou First People’s Hospital from January 2016 to December 2019. Two public high-quality standard external datasets were retrieved and used for the comparison experiments. For each dataset, we randomly segmented the data into training, validation, and testing sets for model training, selection, and testing. We compared the performance of the base models and the ensemble model in segmenting polyps from images with artifacts. RESULTS: The performance of the semantic segmentation model was affected by artifacts in the sample images, which also affected the results of polyp detection by CE using a single model. The evaluation based on real datasets with artifacts and standard datasets showed that the ensemble model of all state-of-the-art models performed better than the best corresponding base learner on the real dataset with artifacts. Compared with the corresponding optimal base learners, the intersection over union (IoU) and dice of the ensemble learning model increased to different degrees, ranging from 0.08% to 7.01% and 0.61% to 4.93%, respectively. Moreover, in the standard datasets without artifacts, most of the ensemble models were slightly better than the base learner, as demonstrated by the IoU and dice increases ranging from -0.28% to 1.20% and -0.61% to 0.76%, respectively. CONCLUSION: Ensemble learning can improve the segmentation accuracy of polyps from CE images with artifacts. Our results demonstrated an improvement in the detection rate of polyps with interference from artifacts.
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spelling pubmed-96698272022-11-18 Enhanced segmentation of gastrointestinal polyps from capsule endoscopy images with artifacts using ensemble learning Zhou, Jun-Xiao Yang, Zhan Xi, Ding-Hao Dai, Shou-Jun Feng, Zhi-Qiang Li, Jun-Yan Xu, Wei Wang, Hong World J Gastroenterol Retrospective Study BACKGROUND: Endoscopy artifacts are widespread in real capsule endoscopy (CE) images but not in high-quality standard datasets. AIM: To improve the segmentation performance of polyps from CE images with artifacts based on ensemble learning. METHODS: We collected 277 polyp images with CE artifacts from 5760 h of videos from 480 patients at Guangzhou First People’s Hospital from January 2016 to December 2019. Two public high-quality standard external datasets were retrieved and used for the comparison experiments. For each dataset, we randomly segmented the data into training, validation, and testing sets for model training, selection, and testing. We compared the performance of the base models and the ensemble model in segmenting polyps from images with artifacts. RESULTS: The performance of the semantic segmentation model was affected by artifacts in the sample images, which also affected the results of polyp detection by CE using a single model. The evaluation based on real datasets with artifacts and standard datasets showed that the ensemble model of all state-of-the-art models performed better than the best corresponding base learner on the real dataset with artifacts. Compared with the corresponding optimal base learners, the intersection over union (IoU) and dice of the ensemble learning model increased to different degrees, ranging from 0.08% to 7.01% and 0.61% to 4.93%, respectively. Moreover, in the standard datasets without artifacts, most of the ensemble models were slightly better than the base learner, as demonstrated by the IoU and dice increases ranging from -0.28% to 1.20% and -0.61% to 0.76%, respectively. CONCLUSION: Ensemble learning can improve the segmentation accuracy of polyps from CE images with artifacts. Our results demonstrated an improvement in the detection rate of polyps with interference from artifacts. Baishideng Publishing Group Inc 2022-11-07 2022-11-07 /pmc/articles/PMC9669827/ /pubmed/36405108 http://dx.doi.org/10.3748/wjg.v28.i41.5931 Text en ©The Author(s) 2022. Published by Baishideng Publishing Group Inc. All rights reserved. https://creativecommons.org/licenses/by-nc/4.0/This article is an open-access article that was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution NonCommercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: https://creativecommons.org/Licenses/by-nc/4.0/
spellingShingle Retrospective Study
Zhou, Jun-Xiao
Yang, Zhan
Xi, Ding-Hao
Dai, Shou-Jun
Feng, Zhi-Qiang
Li, Jun-Yan
Xu, Wei
Wang, Hong
Enhanced segmentation of gastrointestinal polyps from capsule endoscopy images with artifacts using ensemble learning
title Enhanced segmentation of gastrointestinal polyps from capsule endoscopy images with artifacts using ensemble learning
title_full Enhanced segmentation of gastrointestinal polyps from capsule endoscopy images with artifacts using ensemble learning
title_fullStr Enhanced segmentation of gastrointestinal polyps from capsule endoscopy images with artifacts using ensemble learning
title_full_unstemmed Enhanced segmentation of gastrointestinal polyps from capsule endoscopy images with artifacts using ensemble learning
title_short Enhanced segmentation of gastrointestinal polyps from capsule endoscopy images with artifacts using ensemble learning
title_sort enhanced segmentation of gastrointestinal polyps from capsule endoscopy images with artifacts using ensemble learning
topic Retrospective Study
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9669827/
https://www.ncbi.nlm.nih.gov/pubmed/36405108
http://dx.doi.org/10.3748/wjg.v28.i41.5931
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