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Comparative analysis of detoxification-related gene superfamilies across five hemipteran species

BACKGROUND: Hemiptera is one of the most speciose orders of insects, and the most speciose considering Hemimetabola. Through their evolutive history, hemipterans with different feeding habits have adapted to deal with different chemical challenges. Three major gene families are involved in xenobioti...

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Autores principales: Volonté, Mariano, Traverso, Lucila, Estivalis, Jose Manuel Latorre, Almeida, Francisca Cunha, Ons, Sheila
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9670383/
https://www.ncbi.nlm.nih.gov/pubmed/36396986
http://dx.doi.org/10.1186/s12864-022-08974-y
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author Volonté, Mariano
Traverso, Lucila
Estivalis, Jose Manuel Latorre
Almeida, Francisca Cunha
Ons, Sheila
author_facet Volonté, Mariano
Traverso, Lucila
Estivalis, Jose Manuel Latorre
Almeida, Francisca Cunha
Ons, Sheila
author_sort Volonté, Mariano
collection PubMed
description BACKGROUND: Hemiptera is one of the most speciose orders of insects, and the most speciose considering Hemimetabola. Through their evolutive history, hemipterans with different feeding habits have adapted to deal with different chemical challenges. Three major gene families are involved in xenobiotic detoxification in insects: the cytochromes P450 (CYPs), carboxyl/cholinesterases (CCEs), and glutathione transferases (GSTs). Here we perform a comparative analysis on the complement of these gene superfamilies across five hemipteran species; four heteropterans (the pentatomid plant feeders Nezara viridula and Halyomorpha halys; the hematophagous Cimex lectularius, Cimicidae, and Rhodnius prolixus, Reduviidae), and one Auchenorrhyncha plant feeder (Nilaparvata lugens). RESULTS: Our results point to an expansion of several enzyme families associated with xenobiotic detoxification in heteropterans with respect to other species and the existence of a dynamic evolution pattern including CYP3 clan, hormone and pheromone processing class in the CCE superfamily, and sigma class in GST superfamily. Other detoxification-related families are reduced in the hemipteran species analyzed here: reduction or even absence of epsilon class and reduced delta class in GST superfamily; absence of mitochondrial CYP12 family; absence of CYP9 family in CYP3 clan; and reduction or even absence of some dietary/detoxification groups of CCEs. Interestingly, the most polyphagous species analyzed here (H. halys) is also the one that presents the largest repertoire of detoxification enzymes. Gene cluster analysis suggests that this could be due to gene duplication events. CONCLUSIONS: The evolutionary analysis performed here reveals characteristics that are both common and particular for heteropterans. The composition and organization of detoxification-related gene families could shed light on evolutionary forces that shaped their divergence. These families are important for both the detoxification of diet products and for conferring tolerance or resistance to synthetic insecticides. Furthermore, we present the first comprehensive analysis of detoxification gene superfamilies in N. viridula, an understudied species in spite of its economic relevance as a crop pest. The information obtained is of interest for basic insect science as well as for the control of harmful species and the management of insecticide resistance. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12864-022-08974-y.
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spelling pubmed-96703832022-11-18 Comparative analysis of detoxification-related gene superfamilies across five hemipteran species Volonté, Mariano Traverso, Lucila Estivalis, Jose Manuel Latorre Almeida, Francisca Cunha Ons, Sheila BMC Genomics Research BACKGROUND: Hemiptera is one of the most speciose orders of insects, and the most speciose considering Hemimetabola. Through their evolutive history, hemipterans with different feeding habits have adapted to deal with different chemical challenges. Three major gene families are involved in xenobiotic detoxification in insects: the cytochromes P450 (CYPs), carboxyl/cholinesterases (CCEs), and glutathione transferases (GSTs). Here we perform a comparative analysis on the complement of these gene superfamilies across five hemipteran species; four heteropterans (the pentatomid plant feeders Nezara viridula and Halyomorpha halys; the hematophagous Cimex lectularius, Cimicidae, and Rhodnius prolixus, Reduviidae), and one Auchenorrhyncha plant feeder (Nilaparvata lugens). RESULTS: Our results point to an expansion of several enzyme families associated with xenobiotic detoxification in heteropterans with respect to other species and the existence of a dynamic evolution pattern including CYP3 clan, hormone and pheromone processing class in the CCE superfamily, and sigma class in GST superfamily. Other detoxification-related families are reduced in the hemipteran species analyzed here: reduction or even absence of epsilon class and reduced delta class in GST superfamily; absence of mitochondrial CYP12 family; absence of CYP9 family in CYP3 clan; and reduction or even absence of some dietary/detoxification groups of CCEs. Interestingly, the most polyphagous species analyzed here (H. halys) is also the one that presents the largest repertoire of detoxification enzymes. Gene cluster analysis suggests that this could be due to gene duplication events. CONCLUSIONS: The evolutionary analysis performed here reveals characteristics that are both common and particular for heteropterans. The composition and organization of detoxification-related gene families could shed light on evolutionary forces that shaped their divergence. These families are important for both the detoxification of diet products and for conferring tolerance or resistance to synthetic insecticides. Furthermore, we present the first comprehensive analysis of detoxification gene superfamilies in N. viridula, an understudied species in spite of its economic relevance as a crop pest. The information obtained is of interest for basic insect science as well as for the control of harmful species and the management of insecticide resistance. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12864-022-08974-y. BioMed Central 2022-11-17 /pmc/articles/PMC9670383/ /pubmed/36396986 http://dx.doi.org/10.1186/s12864-022-08974-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Volonté, Mariano
Traverso, Lucila
Estivalis, Jose Manuel Latorre
Almeida, Francisca Cunha
Ons, Sheila
Comparative analysis of detoxification-related gene superfamilies across five hemipteran species
title Comparative analysis of detoxification-related gene superfamilies across five hemipteran species
title_full Comparative analysis of detoxification-related gene superfamilies across five hemipteran species
title_fullStr Comparative analysis of detoxification-related gene superfamilies across five hemipteran species
title_full_unstemmed Comparative analysis of detoxification-related gene superfamilies across five hemipteran species
title_short Comparative analysis of detoxification-related gene superfamilies across five hemipteran species
title_sort comparative analysis of detoxification-related gene superfamilies across five hemipteran species
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9670383/
https://www.ncbi.nlm.nih.gov/pubmed/36396986
http://dx.doi.org/10.1186/s12864-022-08974-y
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