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Estimating critical values from electrocardiogram using a deep ordinal convolutional neural network
BACKGROUND: Critical values are commonly used in clinical laboratory tests to define health-related conditions of varying degrees. Knowing the values, people can quickly become aware of health risks, and the health professionals can take immediate actions and save lives. METHODS: In this paper, we p...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9670442/ https://www.ncbi.nlm.nih.gov/pubmed/36384646 http://dx.doi.org/10.1186/s12911-022-02035-w |
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author | Wei, Guodong Di, Xinxin Zhang, Wenrui Geng, Shijia Zhang, Deyun Wang, Kai Fu, Zhaoji Hong, Shenda |
author_facet | Wei, Guodong Di, Xinxin Zhang, Wenrui Geng, Shijia Zhang, Deyun Wang, Kai Fu, Zhaoji Hong, Shenda |
author_sort | Wei, Guodong |
collection | PubMed |
description | BACKGROUND: Critical values are commonly used in clinical laboratory tests to define health-related conditions of varying degrees. Knowing the values, people can quickly become aware of health risks, and the health professionals can take immediate actions and save lives. METHODS: In this paper, we propose a method that extends the concept of critical value to one of the most commonly used physiological signals in the clinical environment—Electrocardiogram (ECG). We first construct a mapping from common ECG diagnostic conclusions to critical values. After that, we build a 61-layer deep convolutional neural network named CardioV, which is characterized by an ordinal classifier. RESULTS: We conduct experiments on a large public ECG dataset, and demonstrate that CardioV achieves a mean absolute error of 0.4984 and a ROC-AUC score of 0.8735. In addition, we find that the model performs better for extreme critical values and the younger age group, while gender does not affect the performance. The ablation study confirms that the ordinal classification mechanism suits for estimating the critical values which contain ranking information. Moreover, model interpretation techniques help us discover that CardioV focuses on the characteristic ECG locations during the critical value estimation process. CONCLUSIONS: As an ordinal classifier, CardioV performs well in estimating ECG critical values that can help people quickly identify different heart conditions. We obtain ROC-AUC scores above 0.8 for all four critical value categories, and find that the extreme values (0 (no risk) and 3 (high risk)) have better model performance than the other two (1 (low risk) and 2 (medium risk)). Results also show that gender does not affect the performance, and the older age group has worse performance than the younger age group. In addition, visualization techniques reveal that the model pays more attention to characteristic ECG locations. |
format | Online Article Text |
id | pubmed-9670442 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-96704422022-11-18 Estimating critical values from electrocardiogram using a deep ordinal convolutional neural network Wei, Guodong Di, Xinxin Zhang, Wenrui Geng, Shijia Zhang, Deyun Wang, Kai Fu, Zhaoji Hong, Shenda BMC Med Inform Decis Mak Research Article BACKGROUND: Critical values are commonly used in clinical laboratory tests to define health-related conditions of varying degrees. Knowing the values, people can quickly become aware of health risks, and the health professionals can take immediate actions and save lives. METHODS: In this paper, we propose a method that extends the concept of critical value to one of the most commonly used physiological signals in the clinical environment—Electrocardiogram (ECG). We first construct a mapping from common ECG diagnostic conclusions to critical values. After that, we build a 61-layer deep convolutional neural network named CardioV, which is characterized by an ordinal classifier. RESULTS: We conduct experiments on a large public ECG dataset, and demonstrate that CardioV achieves a mean absolute error of 0.4984 and a ROC-AUC score of 0.8735. In addition, we find that the model performs better for extreme critical values and the younger age group, while gender does not affect the performance. The ablation study confirms that the ordinal classification mechanism suits for estimating the critical values which contain ranking information. Moreover, model interpretation techniques help us discover that CardioV focuses on the characteristic ECG locations during the critical value estimation process. CONCLUSIONS: As an ordinal classifier, CardioV performs well in estimating ECG critical values that can help people quickly identify different heart conditions. We obtain ROC-AUC scores above 0.8 for all four critical value categories, and find that the extreme values (0 (no risk) and 3 (high risk)) have better model performance than the other two (1 (low risk) and 2 (medium risk)). Results also show that gender does not affect the performance, and the older age group has worse performance than the younger age group. In addition, visualization techniques reveal that the model pays more attention to characteristic ECG locations. BioMed Central 2022-11-16 /pmc/articles/PMC9670442/ /pubmed/36384646 http://dx.doi.org/10.1186/s12911-022-02035-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Wei, Guodong Di, Xinxin Zhang, Wenrui Geng, Shijia Zhang, Deyun Wang, Kai Fu, Zhaoji Hong, Shenda Estimating critical values from electrocardiogram using a deep ordinal convolutional neural network |
title | Estimating critical values from electrocardiogram using a deep ordinal convolutional neural network |
title_full | Estimating critical values from electrocardiogram using a deep ordinal convolutional neural network |
title_fullStr | Estimating critical values from electrocardiogram using a deep ordinal convolutional neural network |
title_full_unstemmed | Estimating critical values from electrocardiogram using a deep ordinal convolutional neural network |
title_short | Estimating critical values from electrocardiogram using a deep ordinal convolutional neural network |
title_sort | estimating critical values from electrocardiogram using a deep ordinal convolutional neural network |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9670442/ https://www.ncbi.nlm.nih.gov/pubmed/36384646 http://dx.doi.org/10.1186/s12911-022-02035-w |
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