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A specific reverse complement sequence for distinguishing Brucella canis from other Brucella species
Canine brucellosis is primarily caused by Brucella canis, but other Brucella species can also cause the disease. Identifying sequences specific to B. canis and establishing PCR assays that can distinguish between B. canis and other Brucella species is essential to determine the etiology of canine br...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9672380/ https://www.ncbi.nlm.nih.gov/pubmed/36406068 http://dx.doi.org/10.3389/fvets.2022.983482 |
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author | Ye, Yin-Bo Yang, Jiang-Hua Li, Dong-Liang Hao, Li-Hua Zhang, Zhao Mei, Si-Yao Zhang, Huan Du, Fang-Yuan Yv, Li-Hui Liu, Bao-Shan Chen, Ze-Liang |
author_facet | Ye, Yin-Bo Yang, Jiang-Hua Li, Dong-Liang Hao, Li-Hua Zhang, Zhao Mei, Si-Yao Zhang, Huan Du, Fang-Yuan Yv, Li-Hui Liu, Bao-Shan Chen, Ze-Liang |
author_sort | Ye, Yin-Bo |
collection | PubMed |
description | Canine brucellosis is primarily caused by Brucella canis, but other Brucella species can also cause the disease. Identifying sequences specific to B. canis and establishing PCR assays that can distinguish between B. canis and other Brucella species is essential to determine the etiology of canine brucellosis and the source of infection and to achieve effective control. We analyzed the gaps and SNPs of genomes I and II from B. canis strain RM6/66 and B. melitensis strain 16M using the Mauve genome alignment software, and the specificity of each of these differential regions was analyzed by BLAST. A 132 bp specific sequence was found between the DK60_915 (glycosyl hydrolase 108 family protein) and DK60_917 (aldose 1-epimerase) loci in B. canis chromosome 1. Further comparative analysis revealed that this is a reverse complement sequence between B. canis and other Brucella species. Then, three primers were designed based on the sequence that could detect B. canis with a 310 bp amplification product or other Brucella species with a 413 bp product. The PCR based on these primers had reasonable specificity and a sensitivity of 100 copies of Brucella DNA. The detection results for the blood samples of the aborted dogs showed a favorable accordance with the Bruce-ladder multiplex PCR assay. In conclusion, we found a specific reverse complement sequence between B. canis and other Brucella and developed a PCR method that allows a more comprehensive identification of the pathogen involved in canine brucellosis. These findings provide an effective means for preventing and controlling brucellosis. |
format | Online Article Text |
id | pubmed-9672380 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96723802022-11-19 A specific reverse complement sequence for distinguishing Brucella canis from other Brucella species Ye, Yin-Bo Yang, Jiang-Hua Li, Dong-Liang Hao, Li-Hua Zhang, Zhao Mei, Si-Yao Zhang, Huan Du, Fang-Yuan Yv, Li-Hui Liu, Bao-Shan Chen, Ze-Liang Front Vet Sci Veterinary Science Canine brucellosis is primarily caused by Brucella canis, but other Brucella species can also cause the disease. Identifying sequences specific to B. canis and establishing PCR assays that can distinguish between B. canis and other Brucella species is essential to determine the etiology of canine brucellosis and the source of infection and to achieve effective control. We analyzed the gaps and SNPs of genomes I and II from B. canis strain RM6/66 and B. melitensis strain 16M using the Mauve genome alignment software, and the specificity of each of these differential regions was analyzed by BLAST. A 132 bp specific sequence was found between the DK60_915 (glycosyl hydrolase 108 family protein) and DK60_917 (aldose 1-epimerase) loci in B. canis chromosome 1. Further comparative analysis revealed that this is a reverse complement sequence between B. canis and other Brucella species. Then, three primers were designed based on the sequence that could detect B. canis with a 310 bp amplification product or other Brucella species with a 413 bp product. The PCR based on these primers had reasonable specificity and a sensitivity of 100 copies of Brucella DNA. The detection results for the blood samples of the aborted dogs showed a favorable accordance with the Bruce-ladder multiplex PCR assay. In conclusion, we found a specific reverse complement sequence between B. canis and other Brucella and developed a PCR method that allows a more comprehensive identification of the pathogen involved in canine brucellosis. These findings provide an effective means for preventing and controlling brucellosis. Frontiers Media S.A. 2022-11-04 /pmc/articles/PMC9672380/ /pubmed/36406068 http://dx.doi.org/10.3389/fvets.2022.983482 Text en Copyright © 2022 Ye, Yang, Li, Hao, Zhang, Mei, Zhang, Du, Yv, Liu and Chen. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Veterinary Science Ye, Yin-Bo Yang, Jiang-Hua Li, Dong-Liang Hao, Li-Hua Zhang, Zhao Mei, Si-Yao Zhang, Huan Du, Fang-Yuan Yv, Li-Hui Liu, Bao-Shan Chen, Ze-Liang A specific reverse complement sequence for distinguishing Brucella canis from other Brucella species |
title | A specific reverse complement sequence for distinguishing Brucella canis from other Brucella species |
title_full | A specific reverse complement sequence for distinguishing Brucella canis from other Brucella species |
title_fullStr | A specific reverse complement sequence for distinguishing Brucella canis from other Brucella species |
title_full_unstemmed | A specific reverse complement sequence for distinguishing Brucella canis from other Brucella species |
title_short | A specific reverse complement sequence for distinguishing Brucella canis from other Brucella species |
title_sort | specific reverse complement sequence for distinguishing brucella canis from other brucella species |
topic | Veterinary Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9672380/ https://www.ncbi.nlm.nih.gov/pubmed/36406068 http://dx.doi.org/10.3389/fvets.2022.983482 |
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