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Automatic search intervals for the smoothing parameter in penalized splines
The selection of smoothing parameter is central to the estimation of penalized splines. The best value of the smoothing parameter is often the one that optimizes a smoothness selection criterion, such as generalized cross-validation error (GCV) and restricted likelihood (REML). To correctly identify...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9672641/ https://www.ncbi.nlm.nih.gov/pubmed/36415568 http://dx.doi.org/10.1007/s11222-022-10178-z |
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author | Li, Zheyuan Cao, Jiguo |
author_facet | Li, Zheyuan Cao, Jiguo |
author_sort | Li, Zheyuan |
collection | PubMed |
description | The selection of smoothing parameter is central to the estimation of penalized splines. The best value of the smoothing parameter is often the one that optimizes a smoothness selection criterion, such as generalized cross-validation error (GCV) and restricted likelihood (REML). To correctly identify the global optimum rather than being trapped in an undesired local optimum, grid search is recommended for optimization. Unfortunately, the grid search method requires a pre-specified search interval that contains the unknown global optimum, yet no guideline is available for providing this interval. As a result, practitioners have to find it by trial and error. To overcome such difficulty, we develop novel algorithms to automatically find this interval. Our automatic search interval has four advantages. (i) It specifies a smoothing parameter range where the associated penalized least squares problem is numerically solvable. (ii) It is criterion-independent so that different criteria, such as GCV and REML, can be explored on the same parameter range. (iii) It is sufficiently wide to contain the global optimum of any criterion, so that for example, the global minimum of GCV and the global maximum of REML can both be identified. (iv) It is computationally cheap compared with the grid search itself, carrying no extra computational burden in practice. Our method is ready to use through our recently developed R package gps ([Formula: see text] version 1.1). It may be embedded in more advanced statistical modeling methods that rely on penalized splines. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11222-022-10178-z. |
format | Online Article Text |
id | pubmed-9672641 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-96726412022-11-18 Automatic search intervals for the smoothing parameter in penalized splines Li, Zheyuan Cao, Jiguo Stat Comput Original Paper The selection of smoothing parameter is central to the estimation of penalized splines. The best value of the smoothing parameter is often the one that optimizes a smoothness selection criterion, such as generalized cross-validation error (GCV) and restricted likelihood (REML). To correctly identify the global optimum rather than being trapped in an undesired local optimum, grid search is recommended for optimization. Unfortunately, the grid search method requires a pre-specified search interval that contains the unknown global optimum, yet no guideline is available for providing this interval. As a result, practitioners have to find it by trial and error. To overcome such difficulty, we develop novel algorithms to automatically find this interval. Our automatic search interval has four advantages. (i) It specifies a smoothing parameter range where the associated penalized least squares problem is numerically solvable. (ii) It is criterion-independent so that different criteria, such as GCV and REML, can be explored on the same parameter range. (iii) It is sufficiently wide to contain the global optimum of any criterion, so that for example, the global minimum of GCV and the global maximum of REML can both be identified. (iv) It is computationally cheap compared with the grid search itself, carrying no extra computational burden in practice. Our method is ready to use through our recently developed R package gps ([Formula: see text] version 1.1). It may be embedded in more advanced statistical modeling methods that rely on penalized splines. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11222-022-10178-z. Springer US 2022-11-18 2023 /pmc/articles/PMC9672641/ /pubmed/36415568 http://dx.doi.org/10.1007/s11222-022-10178-z Text en © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2022, Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Original Paper Li, Zheyuan Cao, Jiguo Automatic search intervals for the smoothing parameter in penalized splines |
title | Automatic search intervals for the smoothing parameter in penalized splines |
title_full | Automatic search intervals for the smoothing parameter in penalized splines |
title_fullStr | Automatic search intervals for the smoothing parameter in penalized splines |
title_full_unstemmed | Automatic search intervals for the smoothing parameter in penalized splines |
title_short | Automatic search intervals for the smoothing parameter in penalized splines |
title_sort | automatic search intervals for the smoothing parameter in penalized splines |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9672641/ https://www.ncbi.nlm.nih.gov/pubmed/36415568 http://dx.doi.org/10.1007/s11222-022-10178-z |
work_keys_str_mv | AT lizheyuan automaticsearchintervalsforthesmoothingparameterinpenalizedsplines AT caojiguo automaticsearchintervalsforthesmoothingparameterinpenalizedsplines |