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A novel DNA damage repair-related signature for predicting prognositc and treatment response in non-small lung cancer

DNA damage repair (DDR) is essential for maintaining genome integrity and modulating cancer risk, progression, and therapeutic response. DDR defects are common among non-small lung cancer (NSCLC), resulting in new challenge and promise for NSCLC treatment. Thus, a thorough understanding of the molec...

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Autores principales: Li, Ling, Zou, Bao-jia, Zhao, Juan-zhi, Liang, Jia-bi, She, Zi-yue, Zhou, Wen-ying, Lin, Si-xiao, Tian, Lin, Luo, Wen-ji, He, Fa-zhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9673481/
https://www.ncbi.nlm.nih.gov/pubmed/36408135
http://dx.doi.org/10.3389/fonc.2022.961274
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author Li, Ling
Zou, Bao-jia
Zhao, Juan-zhi
Liang, Jia-bi
She, Zi-yue
Zhou, Wen-ying
Lin, Si-xiao
Tian, Lin
Luo, Wen-ji
He, Fa-zhong
author_facet Li, Ling
Zou, Bao-jia
Zhao, Juan-zhi
Liang, Jia-bi
She, Zi-yue
Zhou, Wen-ying
Lin, Si-xiao
Tian, Lin
Luo, Wen-ji
He, Fa-zhong
author_sort Li, Ling
collection PubMed
description DNA damage repair (DDR) is essential for maintaining genome integrity and modulating cancer risk, progression, and therapeutic response. DDR defects are common among non-small lung cancer (NSCLC), resulting in new challenge and promise for NSCLC treatment. Thus, a thorough understanding of the molecular characteristics of DDR in NSCLC is helpful for NSCLC treatment and management. Here, we systematically analyzed the relationship between DDR alterations and NSCLC prognosis, and successfully established and validated a six-DDR gene prognostic model via LASSO Cox regression analysis based on the expression of prognostic related DDR genes, CDC25C, NEIL3, H2AFX, NBN, XRCC5, RAD1. According to this model, NSCLC patients were classified into high-risk subtype and low-risk subtype, each of which has significant differences between the two subtypes in clinical features, molecular features, immune cell components, gene mutations, DDR pathway activation status and clinical outcomes. The high-risk patients was characterized with worse prognosis, lower proportion and number of DDR mutations, unique immune profile and responsive to immunetherapy. And the low-risk patients tend to have superior survival, while being less responsive to immunotherapy and more sensitive to treatment with DNA-damaging chemotherapy drugs. Overall, this molecular classification based on DDR expression profile enables hierarchical management of patients and personalized clinical treatment, and provides potential therapeutic targets for NSCLC.
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spelling pubmed-96734812022-11-19 A novel DNA damage repair-related signature for predicting prognositc and treatment response in non-small lung cancer Li, Ling Zou, Bao-jia Zhao, Juan-zhi Liang, Jia-bi She, Zi-yue Zhou, Wen-ying Lin, Si-xiao Tian, Lin Luo, Wen-ji He, Fa-zhong Front Oncol Oncology DNA damage repair (DDR) is essential for maintaining genome integrity and modulating cancer risk, progression, and therapeutic response. DDR defects are common among non-small lung cancer (NSCLC), resulting in new challenge and promise for NSCLC treatment. Thus, a thorough understanding of the molecular characteristics of DDR in NSCLC is helpful for NSCLC treatment and management. Here, we systematically analyzed the relationship between DDR alterations and NSCLC prognosis, and successfully established and validated a six-DDR gene prognostic model via LASSO Cox regression analysis based on the expression of prognostic related DDR genes, CDC25C, NEIL3, H2AFX, NBN, XRCC5, RAD1. According to this model, NSCLC patients were classified into high-risk subtype and low-risk subtype, each of which has significant differences between the two subtypes in clinical features, molecular features, immune cell components, gene mutations, DDR pathway activation status and clinical outcomes. The high-risk patients was characterized with worse prognosis, lower proportion and number of DDR mutations, unique immune profile and responsive to immunetherapy. And the low-risk patients tend to have superior survival, while being less responsive to immunotherapy and more sensitive to treatment with DNA-damaging chemotherapy drugs. Overall, this molecular classification based on DDR expression profile enables hierarchical management of patients and personalized clinical treatment, and provides potential therapeutic targets for NSCLC. Frontiers Media S.A. 2022-11-04 /pmc/articles/PMC9673481/ /pubmed/36408135 http://dx.doi.org/10.3389/fonc.2022.961274 Text en Copyright © 2022 Li, Zou, Zhao, Liang, She, Zhou, Lin, Tian, Luo and He https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Li, Ling
Zou, Bao-jia
Zhao, Juan-zhi
Liang, Jia-bi
She, Zi-yue
Zhou, Wen-ying
Lin, Si-xiao
Tian, Lin
Luo, Wen-ji
He, Fa-zhong
A novel DNA damage repair-related signature for predicting prognositc and treatment response in non-small lung cancer
title A novel DNA damage repair-related signature for predicting prognositc and treatment response in non-small lung cancer
title_full A novel DNA damage repair-related signature for predicting prognositc and treatment response in non-small lung cancer
title_fullStr A novel DNA damage repair-related signature for predicting prognositc and treatment response in non-small lung cancer
title_full_unstemmed A novel DNA damage repair-related signature for predicting prognositc and treatment response in non-small lung cancer
title_short A novel DNA damage repair-related signature for predicting prognositc and treatment response in non-small lung cancer
title_sort novel dna damage repair-related signature for predicting prognositc and treatment response in non-small lung cancer
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9673481/
https://www.ncbi.nlm.nih.gov/pubmed/36408135
http://dx.doi.org/10.3389/fonc.2022.961274
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