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The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines

‘Biasong’ (Citrus micrantha), native to the Southern Philippine Islands, is an important cultivated fruit tree but has no published plastome sequence. We assembled and characterized the C. micrantha chloroplast genome from accession in the germplasm collection of the Institute of Crop Science, Unive...

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Autores principales: Madayag, R. E., Gentallan, R. Jr. P., Quiñones, K. J. O., Bartolome, M. C. B., Vera Cruz, J. R. A., Borromeo, T. H., Endonela, L. E., Timog, E. B. S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9673788/
https://www.ncbi.nlm.nih.gov/pubmed/36406828
http://dx.doi.org/10.1080/23802359.2022.2144515
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author Madayag, R. E.
Gentallan, R. Jr. P.
Quiñones, K. J. O.
Bartolome, M. C. B.
Vera Cruz, J. R. A.
Borromeo, T. H.
Endonela, L. E.
Timog, E. B. S.
author_facet Madayag, R. E.
Gentallan, R. Jr. P.
Quiñones, K. J. O.
Bartolome, M. C. B.
Vera Cruz, J. R. A.
Borromeo, T. H.
Endonela, L. E.
Timog, E. B. S.
author_sort Madayag, R. E.
collection PubMed
description ‘Biasong’ (Citrus micrantha), native to the Southern Philippine Islands, is an important cultivated fruit tree but has no published plastome sequence. We assembled and characterized the C. micrantha chloroplast genome from accession in the germplasm collection of the Institute of Crop Science, University of the Philippines Los Baños. The complete chloroplast (cp) genome sequence is 159,928-bp long with 128 coding genes comprising 83 mRNA genes, 37 tRNA genes, and eight rRNA genes. Out of the mRNA genes, 45 genes code for photosynthesis, 30 genes code for self-replication, and five genes code for other functions. A phylogenetic analysis of the assembled genome, along with 24 Citrus species and three other Rutaceae species, identified Citrus aurantiifolia as its closest relative with available complete cpDNA sequence.
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spelling pubmed-96737882022-11-19 The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines Madayag, R. E. Gentallan, R. Jr. P. Quiñones, K. J. O. Bartolome, M. C. B. Vera Cruz, J. R. A. Borromeo, T. H. Endonela, L. E. Timog, E. B. S. Mitochondrial DNA B Resour Plastome Announcements ‘Biasong’ (Citrus micrantha), native to the Southern Philippine Islands, is an important cultivated fruit tree but has no published plastome sequence. We assembled and characterized the C. micrantha chloroplast genome from accession in the germplasm collection of the Institute of Crop Science, University of the Philippines Los Baños. The complete chloroplast (cp) genome sequence is 159,928-bp long with 128 coding genes comprising 83 mRNA genes, 37 tRNA genes, and eight rRNA genes. Out of the mRNA genes, 45 genes code for photosynthesis, 30 genes code for self-replication, and five genes code for other functions. A phylogenetic analysis of the assembled genome, along with 24 Citrus species and three other Rutaceae species, identified Citrus aurantiifolia as its closest relative with available complete cpDNA sequence. Taylor & Francis 2022-11-15 /pmc/articles/PMC9673788/ /pubmed/36406828 http://dx.doi.org/10.1080/23802359.2022.2144515 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcements
Madayag, R. E.
Gentallan, R. Jr. P.
Quiñones, K. J. O.
Bartolome, M. C. B.
Vera Cruz, J. R. A.
Borromeo, T. H.
Endonela, L. E.
Timog, E. B. S.
The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines
title The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines
title_full The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines
title_fullStr The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines
title_full_unstemmed The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines
title_short The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines
title_sort complete chloroplast genome of ‘biasong’ (citrus micrantha wester), a native species from the southern philippines
topic Plastome Announcements
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9673788/
https://www.ncbi.nlm.nih.gov/pubmed/36406828
http://dx.doi.org/10.1080/23802359.2022.2144515
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