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The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines
‘Biasong’ (Citrus micrantha), native to the Southern Philippine Islands, is an important cultivated fruit tree but has no published plastome sequence. We assembled and characterized the C. micrantha chloroplast genome from accession in the germplasm collection of the Institute of Crop Science, Unive...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9673788/ https://www.ncbi.nlm.nih.gov/pubmed/36406828 http://dx.doi.org/10.1080/23802359.2022.2144515 |
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author | Madayag, R. E. Gentallan, R. Jr. P. Quiñones, K. J. O. Bartolome, M. C. B. Vera Cruz, J. R. A. Borromeo, T. H. Endonela, L. E. Timog, E. B. S. |
author_facet | Madayag, R. E. Gentallan, R. Jr. P. Quiñones, K. J. O. Bartolome, M. C. B. Vera Cruz, J. R. A. Borromeo, T. H. Endonela, L. E. Timog, E. B. S. |
author_sort | Madayag, R. E. |
collection | PubMed |
description | ‘Biasong’ (Citrus micrantha), native to the Southern Philippine Islands, is an important cultivated fruit tree but has no published plastome sequence. We assembled and characterized the C. micrantha chloroplast genome from accession in the germplasm collection of the Institute of Crop Science, University of the Philippines Los Baños. The complete chloroplast (cp) genome sequence is 159,928-bp long with 128 coding genes comprising 83 mRNA genes, 37 tRNA genes, and eight rRNA genes. Out of the mRNA genes, 45 genes code for photosynthesis, 30 genes code for self-replication, and five genes code for other functions. A phylogenetic analysis of the assembled genome, along with 24 Citrus species and three other Rutaceae species, identified Citrus aurantiifolia as its closest relative with available complete cpDNA sequence. |
format | Online Article Text |
id | pubmed-9673788 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-96737882022-11-19 The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines Madayag, R. E. Gentallan, R. Jr. P. Quiñones, K. J. O. Bartolome, M. C. B. Vera Cruz, J. R. A. Borromeo, T. H. Endonela, L. E. Timog, E. B. S. Mitochondrial DNA B Resour Plastome Announcements ‘Biasong’ (Citrus micrantha), native to the Southern Philippine Islands, is an important cultivated fruit tree but has no published plastome sequence. We assembled and characterized the C. micrantha chloroplast genome from accession in the germplasm collection of the Institute of Crop Science, University of the Philippines Los Baños. The complete chloroplast (cp) genome sequence is 159,928-bp long with 128 coding genes comprising 83 mRNA genes, 37 tRNA genes, and eight rRNA genes. Out of the mRNA genes, 45 genes code for photosynthesis, 30 genes code for self-replication, and five genes code for other functions. A phylogenetic analysis of the assembled genome, along with 24 Citrus species and three other Rutaceae species, identified Citrus aurantiifolia as its closest relative with available complete cpDNA sequence. Taylor & Francis 2022-11-15 /pmc/articles/PMC9673788/ /pubmed/36406828 http://dx.doi.org/10.1080/23802359.2022.2144515 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Plastome Announcements Madayag, R. E. Gentallan, R. Jr. P. Quiñones, K. J. O. Bartolome, M. C. B. Vera Cruz, J. R. A. Borromeo, T. H. Endonela, L. E. Timog, E. B. S. The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines |
title | The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines |
title_full | The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines |
title_fullStr | The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines |
title_full_unstemmed | The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines |
title_short | The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines |
title_sort | complete chloroplast genome of ‘biasong’ (citrus micrantha wester), a native species from the southern philippines |
topic | Plastome Announcements |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9673788/ https://www.ncbi.nlm.nih.gov/pubmed/36406828 http://dx.doi.org/10.1080/23802359.2022.2144515 |
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