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A Bayesian switching linear dynamical system for estimating seizure chronotypes

Epilepsy is a disorder characterized by paroxysmal transitions between multistable states. Dynamical systems have been useful for modeling the paroxysmal nature of seizures. At the same time, intracranial electroencephalography (EEG) recordings have recently discovered that an electrographic measure...

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Autores principales: Wang, Emily T., Vannucci, Marina, Haneef, Zulfi, Moss, Robert, Rao, Vikram R., Chiang, Sharon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9674238/
https://www.ncbi.nlm.nih.gov/pubmed/36343269
http://dx.doi.org/10.1073/pnas.2200822119
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author Wang, Emily T.
Vannucci, Marina
Haneef, Zulfi
Moss, Robert
Rao, Vikram R.
Chiang, Sharon
author_facet Wang, Emily T.
Vannucci, Marina
Haneef, Zulfi
Moss, Robert
Rao, Vikram R.
Chiang, Sharon
author_sort Wang, Emily T.
collection PubMed
description Epilepsy is a disorder characterized by paroxysmal transitions between multistable states. Dynamical systems have been useful for modeling the paroxysmal nature of seizures. At the same time, intracranial electroencephalography (EEG) recordings have recently discovered that an electrographic measure of epileptogenicity, interictal epileptiform activity, exhibits cycling patterns ranging from ultradian to multidien rhythmicity, with seizures phase-locked to specific phases of these latent cycles. However, many mechanistic questions about seizure cycles remain unanswered. Here, we provide a principled approach to recast the modeling of seizure chronotypes within a statistical dynamical systems framework by developing a Bayesian switching linear dynamical system (SLDS) with variable selection to estimate latent seizure cycles. We propose a Markov chain Monte Carlo algorithm that employs particle Gibbs with ancestral sampling to estimate latent cycles in epilepsy and apply unsupervised learning on spectral features of latent cycles to uncover clusters in cycling tendency. We analyze the largest database of patient-reported seizures in the world to comprehensively characterize multidien cycling patterns among 1,012 people with epilepsy, spanning from infancy to older adulthood. Our work advances knowledge of cycling in epilepsy by investigating how multidien seizure cycles vary in people with epilepsy, while demonstrating an application of an SLDS to frame seizure cycling within a nonlinear dynamical systems framework. It also lays the groundwork for future studies to pursue data-driven hypothesis generation regarding the mechanistic drivers of seizure cycles.
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spelling pubmed-96742382023-05-07 A Bayesian switching linear dynamical system for estimating seizure chronotypes Wang, Emily T. Vannucci, Marina Haneef, Zulfi Moss, Robert Rao, Vikram R. Chiang, Sharon Proc Natl Acad Sci U S A Physical Sciences Epilepsy is a disorder characterized by paroxysmal transitions between multistable states. Dynamical systems have been useful for modeling the paroxysmal nature of seizures. At the same time, intracranial electroencephalography (EEG) recordings have recently discovered that an electrographic measure of epileptogenicity, interictal epileptiform activity, exhibits cycling patterns ranging from ultradian to multidien rhythmicity, with seizures phase-locked to specific phases of these latent cycles. However, many mechanistic questions about seizure cycles remain unanswered. Here, we provide a principled approach to recast the modeling of seizure chronotypes within a statistical dynamical systems framework by developing a Bayesian switching linear dynamical system (SLDS) with variable selection to estimate latent seizure cycles. We propose a Markov chain Monte Carlo algorithm that employs particle Gibbs with ancestral sampling to estimate latent cycles in epilepsy and apply unsupervised learning on spectral features of latent cycles to uncover clusters in cycling tendency. We analyze the largest database of patient-reported seizures in the world to comprehensively characterize multidien cycling patterns among 1,012 people with epilepsy, spanning from infancy to older adulthood. Our work advances knowledge of cycling in epilepsy by investigating how multidien seizure cycles vary in people with epilepsy, while demonstrating an application of an SLDS to frame seizure cycling within a nonlinear dynamical systems framework. It also lays the groundwork for future studies to pursue data-driven hypothesis generation regarding the mechanistic drivers of seizure cycles. National Academy of Sciences 2022-11-07 2022-11-15 /pmc/articles/PMC9674238/ /pubmed/36343269 http://dx.doi.org/10.1073/pnas.2200822119 Text en Copyright © 2022 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/This article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Physical Sciences
Wang, Emily T.
Vannucci, Marina
Haneef, Zulfi
Moss, Robert
Rao, Vikram R.
Chiang, Sharon
A Bayesian switching linear dynamical system for estimating seizure chronotypes
title A Bayesian switching linear dynamical system for estimating seizure chronotypes
title_full A Bayesian switching linear dynamical system for estimating seizure chronotypes
title_fullStr A Bayesian switching linear dynamical system for estimating seizure chronotypes
title_full_unstemmed A Bayesian switching linear dynamical system for estimating seizure chronotypes
title_short A Bayesian switching linear dynamical system for estimating seizure chronotypes
title_sort bayesian switching linear dynamical system for estimating seizure chronotypes
topic Physical Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9674238/
https://www.ncbi.nlm.nih.gov/pubmed/36343269
http://dx.doi.org/10.1073/pnas.2200822119
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