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A Bayesian switching linear dynamical system for estimating seizure chronotypes
Epilepsy is a disorder characterized by paroxysmal transitions between multistable states. Dynamical systems have been useful for modeling the paroxysmal nature of seizures. At the same time, intracranial electroencephalography (EEG) recordings have recently discovered that an electrographic measure...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Academy of Sciences
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9674238/ https://www.ncbi.nlm.nih.gov/pubmed/36343269 http://dx.doi.org/10.1073/pnas.2200822119 |
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author | Wang, Emily T. Vannucci, Marina Haneef, Zulfi Moss, Robert Rao, Vikram R. Chiang, Sharon |
author_facet | Wang, Emily T. Vannucci, Marina Haneef, Zulfi Moss, Robert Rao, Vikram R. Chiang, Sharon |
author_sort | Wang, Emily T. |
collection | PubMed |
description | Epilepsy is a disorder characterized by paroxysmal transitions between multistable states. Dynamical systems have been useful for modeling the paroxysmal nature of seizures. At the same time, intracranial electroencephalography (EEG) recordings have recently discovered that an electrographic measure of epileptogenicity, interictal epileptiform activity, exhibits cycling patterns ranging from ultradian to multidien rhythmicity, with seizures phase-locked to specific phases of these latent cycles. However, many mechanistic questions about seizure cycles remain unanswered. Here, we provide a principled approach to recast the modeling of seizure chronotypes within a statistical dynamical systems framework by developing a Bayesian switching linear dynamical system (SLDS) with variable selection to estimate latent seizure cycles. We propose a Markov chain Monte Carlo algorithm that employs particle Gibbs with ancestral sampling to estimate latent cycles in epilepsy and apply unsupervised learning on spectral features of latent cycles to uncover clusters in cycling tendency. We analyze the largest database of patient-reported seizures in the world to comprehensively characterize multidien cycling patterns among 1,012 people with epilepsy, spanning from infancy to older adulthood. Our work advances knowledge of cycling in epilepsy by investigating how multidien seizure cycles vary in people with epilepsy, while demonstrating an application of an SLDS to frame seizure cycling within a nonlinear dynamical systems framework. It also lays the groundwork for future studies to pursue data-driven hypothesis generation regarding the mechanistic drivers of seizure cycles. |
format | Online Article Text |
id | pubmed-9674238 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-96742382023-05-07 A Bayesian switching linear dynamical system for estimating seizure chronotypes Wang, Emily T. Vannucci, Marina Haneef, Zulfi Moss, Robert Rao, Vikram R. Chiang, Sharon Proc Natl Acad Sci U S A Physical Sciences Epilepsy is a disorder characterized by paroxysmal transitions between multistable states. Dynamical systems have been useful for modeling the paroxysmal nature of seizures. At the same time, intracranial electroencephalography (EEG) recordings have recently discovered that an electrographic measure of epileptogenicity, interictal epileptiform activity, exhibits cycling patterns ranging from ultradian to multidien rhythmicity, with seizures phase-locked to specific phases of these latent cycles. However, many mechanistic questions about seizure cycles remain unanswered. Here, we provide a principled approach to recast the modeling of seizure chronotypes within a statistical dynamical systems framework by developing a Bayesian switching linear dynamical system (SLDS) with variable selection to estimate latent seizure cycles. We propose a Markov chain Monte Carlo algorithm that employs particle Gibbs with ancestral sampling to estimate latent cycles in epilepsy and apply unsupervised learning on spectral features of latent cycles to uncover clusters in cycling tendency. We analyze the largest database of patient-reported seizures in the world to comprehensively characterize multidien cycling patterns among 1,012 people with epilepsy, spanning from infancy to older adulthood. Our work advances knowledge of cycling in epilepsy by investigating how multidien seizure cycles vary in people with epilepsy, while demonstrating an application of an SLDS to frame seizure cycling within a nonlinear dynamical systems framework. It also lays the groundwork for future studies to pursue data-driven hypothesis generation regarding the mechanistic drivers of seizure cycles. National Academy of Sciences 2022-11-07 2022-11-15 /pmc/articles/PMC9674238/ /pubmed/36343269 http://dx.doi.org/10.1073/pnas.2200822119 Text en Copyright © 2022 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/This article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Physical Sciences Wang, Emily T. Vannucci, Marina Haneef, Zulfi Moss, Robert Rao, Vikram R. Chiang, Sharon A Bayesian switching linear dynamical system for estimating seizure chronotypes |
title | A Bayesian switching linear dynamical system for estimating seizure chronotypes |
title_full | A Bayesian switching linear dynamical system for estimating seizure chronotypes |
title_fullStr | A Bayesian switching linear dynamical system for estimating seizure chronotypes |
title_full_unstemmed | A Bayesian switching linear dynamical system for estimating seizure chronotypes |
title_short | A Bayesian switching linear dynamical system for estimating seizure chronotypes |
title_sort | bayesian switching linear dynamical system for estimating seizure chronotypes |
topic | Physical Sciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9674238/ https://www.ncbi.nlm.nih.gov/pubmed/36343269 http://dx.doi.org/10.1073/pnas.2200822119 |
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