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SARS-CoV-2 RNA levels in Scotland’s wastewater

Nationwide, wastewater-based monitoring was newly established in Scotland to track the levels of SARS-CoV-2 viral RNA shed into the sewage network, during the COVID-19 pandemic. We present a curated, reference dataset produced by this national programme, from May 2020 to February 2022. Viral levels...

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Autores principales: Scorza, Livia C. T., Cameron, Graeme J., Murray-Williams, Roisin, Findlay, David, Bolland, Julie, Cerghizan, Brindusa, Campbell, Kirsty, Thomson, David, Corbishley, Alexander, Gally, David, Fitzgerald, Stephen, Low, Alison, McAteer, Sean, Roberts, Adrian M. I., Fang, Zhou, Mayer, Claus-Dieter, Frantsuzova, Anastasia, Baby, Sumy V., Zieliński, Tomasz, Millar, Andrew J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9674653/
https://www.ncbi.nlm.nih.gov/pubmed/36400814
http://dx.doi.org/10.1038/s41597-022-01788-3
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author Scorza, Livia C. T.
Cameron, Graeme J.
Murray-Williams, Roisin
Findlay, David
Bolland, Julie
Cerghizan, Brindusa
Campbell, Kirsty
Thomson, David
Corbishley, Alexander
Gally, David
Fitzgerald, Stephen
Low, Alison
McAteer, Sean
Roberts, Adrian M. I.
Fang, Zhou
Mayer, Claus-Dieter
Frantsuzova, Anastasia
Baby, Sumy V.
Zieliński, Tomasz
Millar, Andrew J.
author_facet Scorza, Livia C. T.
Cameron, Graeme J.
Murray-Williams, Roisin
Findlay, David
Bolland, Julie
Cerghizan, Brindusa
Campbell, Kirsty
Thomson, David
Corbishley, Alexander
Gally, David
Fitzgerald, Stephen
Low, Alison
McAteer, Sean
Roberts, Adrian M. I.
Fang, Zhou
Mayer, Claus-Dieter
Frantsuzova, Anastasia
Baby, Sumy V.
Zieliński, Tomasz
Millar, Andrew J.
author_sort Scorza, Livia C. T.
collection PubMed
description Nationwide, wastewater-based monitoring was newly established in Scotland to track the levels of SARS-CoV-2 viral RNA shed into the sewage network, during the COVID-19 pandemic. We present a curated, reference dataset produced by this national programme, from May 2020 to February 2022. Viral levels were analysed by RT-qPCR assays of the N1 gene, on RNA extracted from wastewater sampled at 162 locations. Locations were sampled up to four times per week, typically once or twice per week, and in response to local needs. We report sampling site locations with geographical coordinates, the total population in the catchment for each site, and the information necessary for data normalisation, such as the incoming wastewater flow values and ammonia concentration, when these were available. The methodology for viral quantification and data analysis is briefly described, with links to detailed protocols online. These wastewater data are contributing to estimates of disease prevalence and the viral reproduction number (R) in Scotland and in the UK.
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spelling pubmed-96746532022-11-20 SARS-CoV-2 RNA levels in Scotland’s wastewater Scorza, Livia C. T. Cameron, Graeme J. Murray-Williams, Roisin Findlay, David Bolland, Julie Cerghizan, Brindusa Campbell, Kirsty Thomson, David Corbishley, Alexander Gally, David Fitzgerald, Stephen Low, Alison McAteer, Sean Roberts, Adrian M. I. Fang, Zhou Mayer, Claus-Dieter Frantsuzova, Anastasia Baby, Sumy V. Zieliński, Tomasz Millar, Andrew J. Sci Data Data Descriptor Nationwide, wastewater-based monitoring was newly established in Scotland to track the levels of SARS-CoV-2 viral RNA shed into the sewage network, during the COVID-19 pandemic. We present a curated, reference dataset produced by this national programme, from May 2020 to February 2022. Viral levels were analysed by RT-qPCR assays of the N1 gene, on RNA extracted from wastewater sampled at 162 locations. Locations were sampled up to four times per week, typically once or twice per week, and in response to local needs. We report sampling site locations with geographical coordinates, the total population in the catchment for each site, and the information necessary for data normalisation, such as the incoming wastewater flow values and ammonia concentration, when these were available. The methodology for viral quantification and data analysis is briefly described, with links to detailed protocols online. These wastewater data are contributing to estimates of disease prevalence and the viral reproduction number (R) in Scotland and in the UK. Nature Publishing Group UK 2022-11-18 /pmc/articles/PMC9674653/ /pubmed/36400814 http://dx.doi.org/10.1038/s41597-022-01788-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Data Descriptor
Scorza, Livia C. T.
Cameron, Graeme J.
Murray-Williams, Roisin
Findlay, David
Bolland, Julie
Cerghizan, Brindusa
Campbell, Kirsty
Thomson, David
Corbishley, Alexander
Gally, David
Fitzgerald, Stephen
Low, Alison
McAteer, Sean
Roberts, Adrian M. I.
Fang, Zhou
Mayer, Claus-Dieter
Frantsuzova, Anastasia
Baby, Sumy V.
Zieliński, Tomasz
Millar, Andrew J.
SARS-CoV-2 RNA levels in Scotland’s wastewater
title SARS-CoV-2 RNA levels in Scotland’s wastewater
title_full SARS-CoV-2 RNA levels in Scotland’s wastewater
title_fullStr SARS-CoV-2 RNA levels in Scotland’s wastewater
title_full_unstemmed SARS-CoV-2 RNA levels in Scotland’s wastewater
title_short SARS-CoV-2 RNA levels in Scotland’s wastewater
title_sort sars-cov-2 rna levels in scotland’s wastewater
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9674653/
https://www.ncbi.nlm.nih.gov/pubmed/36400814
http://dx.doi.org/10.1038/s41597-022-01788-3
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