Cargando…

Hyperspectral imaging-based classification of rice leaf blast severity over multiple growth stages

BACKGROUND: Rice blast, which is prevalent worldwide, represents a serious threat to harvested crop yield and quality. Hyperspectral imaging, an emerging technology used in plant disease research, is a stable, repeatable method for disease grading. Current methods for assessing disease severity have...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Guosheng, Xu, Tongyu, Tian, Youwen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9675130/
https://www.ncbi.nlm.nih.gov/pubmed/36403061
http://dx.doi.org/10.1186/s13007-022-00955-2
_version_ 1784833302519087104
author Zhang, Guosheng
Xu, Tongyu
Tian, Youwen
author_facet Zhang, Guosheng
Xu, Tongyu
Tian, Youwen
author_sort Zhang, Guosheng
collection PubMed
description BACKGROUND: Rice blast, which is prevalent worldwide, represents a serious threat to harvested crop yield and quality. Hyperspectral imaging, an emerging technology used in plant disease research, is a stable, repeatable method for disease grading. Current methods for assessing disease severity have mostly focused on individual growth stages rather than multiple ones. In this study, the spectral reflectance ratio (SRR) of whole leaves were calculated, the sensitive wave bands were selected using the successive projections algorithm (SPA) and the support vector machine (SVM) models were constructed to assess rice leaf blast severity over multiple growth stages. RESULTS: The average accuracy, micro F1 values, and macro F1 values of the full-spectrum-based SVM model were respectively 94.75%, 0.869, and 0.883 in 2019; 92.92%, 0.823, and 0.808 in 2021; and 88.09%, 0.702, and 0.757 under the 2019–2021 combined model. The SRR–SVM model could be used to evaluate rice leaf blast disease during multiple growth stages and had good generalizability. CONCLUSIONS: The proposed SRR data analysis method is able to eliminate differences among individuals to some extent, thus allowing for its application to assess rice leaf blast severity over multiple growth stages. Our approach, which can supplement single-stage disease-degree classification, provides a possible direction for future research on the assessment of plant disease severity during multiple growth stages.
format Online
Article
Text
id pubmed-9675130
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-96751302022-11-20 Hyperspectral imaging-based classification of rice leaf blast severity over multiple growth stages Zhang, Guosheng Xu, Tongyu Tian, Youwen Plant Methods Research BACKGROUND: Rice blast, which is prevalent worldwide, represents a serious threat to harvested crop yield and quality. Hyperspectral imaging, an emerging technology used in plant disease research, is a stable, repeatable method for disease grading. Current methods for assessing disease severity have mostly focused on individual growth stages rather than multiple ones. In this study, the spectral reflectance ratio (SRR) of whole leaves were calculated, the sensitive wave bands were selected using the successive projections algorithm (SPA) and the support vector machine (SVM) models were constructed to assess rice leaf blast severity over multiple growth stages. RESULTS: The average accuracy, micro F1 values, and macro F1 values of the full-spectrum-based SVM model were respectively 94.75%, 0.869, and 0.883 in 2019; 92.92%, 0.823, and 0.808 in 2021; and 88.09%, 0.702, and 0.757 under the 2019–2021 combined model. The SRR–SVM model could be used to evaluate rice leaf blast disease during multiple growth stages and had good generalizability. CONCLUSIONS: The proposed SRR data analysis method is able to eliminate differences among individuals to some extent, thus allowing for its application to assess rice leaf blast severity over multiple growth stages. Our approach, which can supplement single-stage disease-degree classification, provides a possible direction for future research on the assessment of plant disease severity during multiple growth stages. BioMed Central 2022-11-19 /pmc/articles/PMC9675130/ /pubmed/36403061 http://dx.doi.org/10.1186/s13007-022-00955-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Zhang, Guosheng
Xu, Tongyu
Tian, Youwen
Hyperspectral imaging-based classification of rice leaf blast severity over multiple growth stages
title Hyperspectral imaging-based classification of rice leaf blast severity over multiple growth stages
title_full Hyperspectral imaging-based classification of rice leaf blast severity over multiple growth stages
title_fullStr Hyperspectral imaging-based classification of rice leaf blast severity over multiple growth stages
title_full_unstemmed Hyperspectral imaging-based classification of rice leaf blast severity over multiple growth stages
title_short Hyperspectral imaging-based classification of rice leaf blast severity over multiple growth stages
title_sort hyperspectral imaging-based classification of rice leaf blast severity over multiple growth stages
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9675130/
https://www.ncbi.nlm.nih.gov/pubmed/36403061
http://dx.doi.org/10.1186/s13007-022-00955-2
work_keys_str_mv AT zhangguosheng hyperspectralimagingbasedclassificationofriceleafblastseverityovermultiplegrowthstages
AT xutongyu hyperspectralimagingbasedclassificationofriceleafblastseverityovermultiplegrowthstages
AT tianyouwen hyperspectralimagingbasedclassificationofriceleafblastseverityovermultiplegrowthstages