Cargando…

Genome analysis of a new sulphur disproportionating species Thermosulfurimonas strain F29 and comparative genomics of sulfur-disproportionating bacteria from marine hydrothermal vents

This paper reports on the genome analysis of strain F29 representing a new species of the genus Thermosulfurimonas . This strain, isolated from the Lucky Strike hydrothermal vent field on the Mid-Atlantic Ridge, is able to grow by disproportionation of S(0) with CO(2) as a carbon source. Strain F29...

Descripción completa

Detalles Bibliográficos
Autores principales: Allioux, Maxime, Yvenou, Stéven, Godfroy, Anne, Shao, Zongze, Jebbar, Mohamed, Alain, Karine
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9676032/
https://www.ncbi.nlm.nih.gov/pubmed/36136081
http://dx.doi.org/10.1099/mgen.0.000865
_version_ 1784833503159910400
author Allioux, Maxime
Yvenou, Stéven
Godfroy, Anne
Shao, Zongze
Jebbar, Mohamed
Alain, Karine
author_facet Allioux, Maxime
Yvenou, Stéven
Godfroy, Anne
Shao, Zongze
Jebbar, Mohamed
Alain, Karine
author_sort Allioux, Maxime
collection PubMed
description This paper reports on the genome analysis of strain F29 representing a new species of the genus Thermosulfurimonas . This strain, isolated from the Lucky Strike hydrothermal vent field on the Mid-Atlantic Ridge, is able to grow by disproportionation of S(0) with CO(2) as a carbon source. Strain F29 possesses a genome of 2,345,565 bp, with a G+C content of 58.09%, and at least one plasmid. The genome analysis revealed complete sets of genes for CO(2) fixation via the Wood–Ljungdahl pathway, for sulphate-reduction and for hydrogen oxidation, suggesting the involvement of the strain into carbon, sulphur, and hydrogen cycles of deep-sea hydrothermal vents. Strain F29 genome encodes also several CRISPR sequences, suggesting that the strain may be subjected to viral attacks. Comparative genomics was carried out to decipher sulphur disproportionation pathways. Genomes of sulphur-disproportionating bacteria from marine hydrothermal vents were compared to the genomes of non-sulphur-disproportionating bacteria. This analysis revealed the ubiquitous presence in these genomes of a molybdopterin protein consisting of a large and a small subunit, and an associated chaperone. We hypothesize that these proteins may be involved in the process of elemental sulphur disproportionation.
format Online
Article
Text
id pubmed-9676032
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Microbiology Society
record_format MEDLINE/PubMed
spelling pubmed-96760322022-11-21 Genome analysis of a new sulphur disproportionating species Thermosulfurimonas strain F29 and comparative genomics of sulfur-disproportionating bacteria from marine hydrothermal vents Allioux, Maxime Yvenou, Stéven Godfroy, Anne Shao, Zongze Jebbar, Mohamed Alain, Karine Microb Genom Research Articles This paper reports on the genome analysis of strain F29 representing a new species of the genus Thermosulfurimonas . This strain, isolated from the Lucky Strike hydrothermal vent field on the Mid-Atlantic Ridge, is able to grow by disproportionation of S(0) with CO(2) as a carbon source. Strain F29 possesses a genome of 2,345,565 bp, with a G+C content of 58.09%, and at least one plasmid. The genome analysis revealed complete sets of genes for CO(2) fixation via the Wood–Ljungdahl pathway, for sulphate-reduction and for hydrogen oxidation, suggesting the involvement of the strain into carbon, sulphur, and hydrogen cycles of deep-sea hydrothermal vents. Strain F29 genome encodes also several CRISPR sequences, suggesting that the strain may be subjected to viral attacks. Comparative genomics was carried out to decipher sulphur disproportionation pathways. Genomes of sulphur-disproportionating bacteria from marine hydrothermal vents were compared to the genomes of non-sulphur-disproportionating bacteria. This analysis revealed the ubiquitous presence in these genomes of a molybdopterin protein consisting of a large and a small subunit, and an associated chaperone. We hypothesize that these proteins may be involved in the process of elemental sulphur disproportionation. Microbiology Society 2022-09-22 /pmc/articles/PMC9676032/ /pubmed/36136081 http://dx.doi.org/10.1099/mgen.0.000865 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution NonCommercial License.
spellingShingle Research Articles
Allioux, Maxime
Yvenou, Stéven
Godfroy, Anne
Shao, Zongze
Jebbar, Mohamed
Alain, Karine
Genome analysis of a new sulphur disproportionating species Thermosulfurimonas strain F29 and comparative genomics of sulfur-disproportionating bacteria from marine hydrothermal vents
title Genome analysis of a new sulphur disproportionating species Thermosulfurimonas strain F29 and comparative genomics of sulfur-disproportionating bacteria from marine hydrothermal vents
title_full Genome analysis of a new sulphur disproportionating species Thermosulfurimonas strain F29 and comparative genomics of sulfur-disproportionating bacteria from marine hydrothermal vents
title_fullStr Genome analysis of a new sulphur disproportionating species Thermosulfurimonas strain F29 and comparative genomics of sulfur-disproportionating bacteria from marine hydrothermal vents
title_full_unstemmed Genome analysis of a new sulphur disproportionating species Thermosulfurimonas strain F29 and comparative genomics of sulfur-disproportionating bacteria from marine hydrothermal vents
title_short Genome analysis of a new sulphur disproportionating species Thermosulfurimonas strain F29 and comparative genomics of sulfur-disproportionating bacteria from marine hydrothermal vents
title_sort genome analysis of a new sulphur disproportionating species thermosulfurimonas strain f29 and comparative genomics of sulfur-disproportionating bacteria from marine hydrothermal vents
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9676032/
https://www.ncbi.nlm.nih.gov/pubmed/36136081
http://dx.doi.org/10.1099/mgen.0.000865
work_keys_str_mv AT alliouxmaxime genomeanalysisofanewsulphurdisproportionatingspeciesthermosulfurimonasstrainf29andcomparativegenomicsofsulfurdisproportionatingbacteriafrommarinehydrothermalvents
AT yvenousteven genomeanalysisofanewsulphurdisproportionatingspeciesthermosulfurimonasstrainf29andcomparativegenomicsofsulfurdisproportionatingbacteriafrommarinehydrothermalvents
AT godfroyanne genomeanalysisofanewsulphurdisproportionatingspeciesthermosulfurimonasstrainf29andcomparativegenomicsofsulfurdisproportionatingbacteriafrommarinehydrothermalvents
AT shaozongze genomeanalysisofanewsulphurdisproportionatingspeciesthermosulfurimonasstrainf29andcomparativegenomicsofsulfurdisproportionatingbacteriafrommarinehydrothermalvents
AT jebbarmohamed genomeanalysisofanewsulphurdisproportionatingspeciesthermosulfurimonasstrainf29andcomparativegenomicsofsulfurdisproportionatingbacteriafrommarinehydrothermalvents
AT alainkarine genomeanalysisofanewsulphurdisproportionatingspeciesthermosulfurimonasstrainf29andcomparativegenomicsofsulfurdisproportionatingbacteriafrommarinehydrothermalvents