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A Carbon Is a Carbon Is a Carbon: Orbital-Free Simulations of Hydrocarbon Chemistry without Resort to Atom Types
[Image: see text] Semiclassical electrons (aka Lewis dots) have been a mainstay of chemists’ thinking about molecular structure, polarizability, and reactivity for over a century. This utility has motivated the development of a corresponding quantitative description. Here we devise pairwise potentia...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9677428/ https://www.ncbi.nlm.nih.gov/pubmed/36332635 http://dx.doi.org/10.1021/acs.jpca.2c05338 |
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author | Li, Jicun Song, Xinrui Li, Pinyuan Herzfeld, Judith |
author_facet | Li, Jicun Song, Xinrui Li, Pinyuan Herzfeld, Judith |
author_sort | Li, Jicun |
collection | PubMed |
description | [Image: see text] Semiclassical electrons (aka Lewis dots) have been a mainstay of chemists’ thinking about molecular structure, polarizability, and reactivity for over a century. This utility has motivated the development of a corresponding quantitative description. Here we devise pairwise potentials that describe the behavior of valence electron pairs in hydrocarbons, including those in single, double, bridge, and bent bonds of linear, branched, and cyclic compounds, including anionic and cationic states. Beyond predicting structures and energies, the new subatomistic force field, dubbed LEWIS-B, efficiently simulates carbocation addition to a double bond and cation migration to a neighboring carbon. A crucial feature of the semiclassical electrons is variable spread, a fourth degree of freedom in addition to three Cartesian coordinates. In spontaneously adapting to different environments, the spread provides a signature of electron stability, with more contracted clouds where the electron interactions are favorable and expanded clouds where electrons are less tightly held. In addition, the pair potentials provide insight into the subtle trade-offs that govern isomerizations and reactions. |
format | Online Article Text |
id | pubmed-9677428 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-96774282022-11-22 A Carbon Is a Carbon Is a Carbon: Orbital-Free Simulations of Hydrocarbon Chemistry without Resort to Atom Types Li, Jicun Song, Xinrui Li, Pinyuan Herzfeld, Judith J Phys Chem A [Image: see text] Semiclassical electrons (aka Lewis dots) have been a mainstay of chemists’ thinking about molecular structure, polarizability, and reactivity for over a century. This utility has motivated the development of a corresponding quantitative description. Here we devise pairwise potentials that describe the behavior of valence electron pairs in hydrocarbons, including those in single, double, bridge, and bent bonds of linear, branched, and cyclic compounds, including anionic and cationic states. Beyond predicting structures and energies, the new subatomistic force field, dubbed LEWIS-B, efficiently simulates carbocation addition to a double bond and cation migration to a neighboring carbon. A crucial feature of the semiclassical electrons is variable spread, a fourth degree of freedom in addition to three Cartesian coordinates. In spontaneously adapting to different environments, the spread provides a signature of electron stability, with more contracted clouds where the electron interactions are favorable and expanded clouds where electrons are less tightly held. In addition, the pair potentials provide insight into the subtle trade-offs that govern isomerizations and reactions. American Chemical Society 2022-11-04 2022-11-17 /pmc/articles/PMC9677428/ /pubmed/36332635 http://dx.doi.org/10.1021/acs.jpca.2c05338 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Li, Jicun Song, Xinrui Li, Pinyuan Herzfeld, Judith A Carbon Is a Carbon Is a Carbon: Orbital-Free Simulations of Hydrocarbon Chemistry without Resort to Atom Types |
title | A Carbon Is a Carbon
Is a Carbon: Orbital-Free Simulations
of Hydrocarbon Chemistry without Resort to Atom Types |
title_full | A Carbon Is a Carbon
Is a Carbon: Orbital-Free Simulations
of Hydrocarbon Chemistry without Resort to Atom Types |
title_fullStr | A Carbon Is a Carbon
Is a Carbon: Orbital-Free Simulations
of Hydrocarbon Chemistry without Resort to Atom Types |
title_full_unstemmed | A Carbon Is a Carbon
Is a Carbon: Orbital-Free Simulations
of Hydrocarbon Chemistry without Resort to Atom Types |
title_short | A Carbon Is a Carbon
Is a Carbon: Orbital-Free Simulations
of Hydrocarbon Chemistry without Resort to Atom Types |
title_sort | carbon is a carbon
is a carbon: orbital-free simulations
of hydrocarbon chemistry without resort to atom types |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9677428/ https://www.ncbi.nlm.nih.gov/pubmed/36332635 http://dx.doi.org/10.1021/acs.jpca.2c05338 |
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